RNA–Protein interactions for RNA: ENST00000489130.2

SRRM1-216, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 2

Gene SRRM1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-216ENST00000489130 DSEQ9UL01 958 aa13.58□□□□□ -0.24
SRRM1-216ENST00000489130 YIPF1Q9Y548 306 aa13.58□□□□□ -0.24
SRRM1-216ENST00000489130 MYO15AQ9UKN7 3530 aa13.58□□□□□ -0.24
SRRM1-216ENST00000489130 TSC2P49815 1807 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 MTMR11A4FU01 709 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 H0Y858 1186 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 ZNF197O14709 1029 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 ECI2O75521 394 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 PRPF6O94906 941 aaKnown RBP13.57□□□□□ -0.24
SRRM1-216ENST00000489130 CCR2P41597 374 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 TAF6P49848 677 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 WNT7BP56706 349 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 GPC5P78333 572 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 AMPD3Q01432 767 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 DUSP4Q13115 394 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 PLD1Q13393 1074 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 PKP1Q13835 747 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 CYP4A22Q5TCH4 519 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 IQCEQ6IPM2 695 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 STXBP4Q6ZWJ1 553 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 PDZD4Q76G19 769 aaPredicted RBP13.57□□□□□ -0.24
SRRM1-216ENST00000489130 OR10T2Q8NGX3 314 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 DHX58Q96C10 678 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 TCEAL4Q96EI5 215 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 MCRS1Q96EZ8 462 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 BORCS6Q96GS4 357 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 ZNF512Q96ME7 567 aaPredicted RBP13.57□□□□□ -0.24
SRRM1-216ENST00000489130 PGLYRP2Q96PD5 576 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 KXD1Q9BQD3 176 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 TBC1D17Q9HA65 648 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 MAGEF1Q9HAY2 307 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 RBAKQ9NYW8 714 aaPredicted RBP13.57□□□□□ -0.24
SRRM1-216ENST00000489130 HSFX1Q9UBD0 423 aa13.57□□□□□ -0.24
SRRM1-216ENST00000489130 NRG2O14511 850 aaPredicted RBP13.56□□□□□ -0.24
SRRM1-216ENST00000489130 CYB561D2O14569 222 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 KIAA0391O15091 583 aaKnown RBP13.56□□□□□ -0.24
SRRM1-216ENST00000489130 EIF3DO15371 548 aaKnown RBP eCLIP13.56□□□□□ -0.24
SRRM1-216ENST00000489130 EXTL3O43909 919 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 MOSPD3O75425 235 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 ASIC1P78348 528 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 FOXD4L6Q3SYB3 417 aaPredicted RBP13.56□□□□□ -0.24
SRRM1-216ENST00000489130 SV2CQ496J9 727 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 CENPPQ6IPU0 288 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 ARMCX5Q6P1M9 558 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 FOXD4L3Q6VB84 417 aaPredicted RBP13.56□□□□□ -0.24
SRRM1-216ENST00000489130 CCDC105Q8IYK2 499 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 HS6ST3Q8IZP7 471 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 GLIS3Q8NEA6 775 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 HPS3Q969F9 1004 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 ZNF560Q96MR9 790 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 TMEM209Q96SK2 561 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 C7orf25Q9BPX7 421 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 PYM1Q9BRP8 204 aaKnown RBP13.56□□□□□ -0.24
SRRM1-216ENST00000489130 ZCWPW1Q9H0M4 648 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 DNAJC25Q9H1X3 360 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 ASAH2Q9NR71 780 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 PCDHA7Q9UN72 937 aa13.56□□□□□ -0.24
SRRM1-216ENST00000489130 DMDP11532 3685 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 PIEZO1Q92508 2521 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 GOLGA8IPA6NC78 632 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 GOLGA8JA6NMD2 632 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 KPNA7A9QM74 516 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 POLR2DO15514 142 aaKnown RBP13.55□□□□□ -0.24
SRRM1-216ENST00000489130 RFX1P22670 979 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 FCARP24071 287 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 HOXD13P35453 343 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 PNPLA4P41247 253 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 ME1P48163 572 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 EPHB3P54753 998 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 STARD6P59095 220 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 TFAMQ00059 246 aaKnown RBP13.55□□□□□ -0.24
SRRM1-216ENST00000489130 PFKPQ01813 784 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 EHHADHQ08426 723 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 RESP18Q5W5W9 173 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 TANGO2Q6ICL3 276 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 EPM2AIP1Q7L775 607 aaPredicted RBP13.55□□□□□ -0.24
SRRM1-216ENST00000489130 METTL23Q86XA0 190 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 TMC8Q8IU68 726 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 GPD1LQ8N335 351 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 C1orf127Q8N9H9 656 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 DTWD2Q8NBA8 298 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 ATAD1Q8NBU5 361 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 CXorf38Q8TB03 319 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 ATOH1Q92858 354 aaPredicted RBP13.55□□□□□ -0.24
SRRM1-216ENST00000489130 ELSPBP1Q96BH3 223 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 SHDQ96IW2 340 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 ASB16Q96NS5 453 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 DDX23Q9BUQ8 820 aaKnown RBP13.55□□□□□ -0.24
SRRM1-216ENST00000489130 LRRC3Q9BY71 257 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 PCIF1Q9H4Z3 704 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 FAM86C1Q9NVL1 165 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 CFAP45Q9UL16 551 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 GTF3C3Q9Y5Q9 886 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 USP34Q70CQ2 3546 aa13.55□□□□□ -0.24
SRRM1-216ENST00000489130 ITGB3P05106 788 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 POLR2BP30876 1174 aaKnown RBP13.54□□□□□ -0.24
SRRM1-216ENST00000489130 ALDH1A3P47895 512 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 PRKCQQ04759 706 aa13.54□□□□□ -0.24
SRRM1-216ENST00000489130 DNM1Q05193 864 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms