RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 TAF6P49848 677 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 WNT7BP56706 349 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 GPR17Q13304 367 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 MYBPC2Q14324 1141 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 IQCEQ6IPM2 695 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 PDZD4Q76G19 769 aaPredicted RBP24.88■■□□□ 1.57
COL9A3-213ENST00000489045 BRSK2Q8IWQ3 736 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 HS6ST3Q8IZP7 471 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 SPRYD3Q8NCJ5 442 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 ZNF512Q96ME7 567 aaPredicted RBP24.88■■□□□ 1.57
COL9A3-213ENST00000489045 TMEM209Q96SK2 561 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 TRIM9Q9C026 710 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 LRRC27Q9C0I9 530 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 CRISPLD1Q9H336 500 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 CUEDC2Q9H467 287 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 MIA3Q5JRA6 1907 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 COL4A3Q01955 1670 aa24.88■■□□□ 1.57
COL9A3-213ENST00000489045 TULP1O00294 542 aaPredicted RBP24.87■■□□□ 1.57
COL9A3-213ENST00000489045 NRG2O14511 850 aaPredicted RBP24.87■■□□□ 1.57
COL9A3-213ENST00000489045 ZNF197O14709 1029 aa24.87■■□□□ 1.57
COL9A3-213ENST00000489045 CYP11A1P05108 521 aa24.87■■□□□ 1.57
COL9A3-213ENST00000489045 DUSP4Q13115 394 aa24.87■■□□□ 1.57
COL9A3-213ENST00000489045 PKP1Q13835 747 aa24.87■■□□□ 1.57
COL9A3-213ENST00000489045 NT5DC4Q86YG4 428 aa24.87■■□□□ 1.57
COL9A3-213ENST00000489045 GLIS3Q8NEA6 775 aa24.87■■□□□ 1.57
COL9A3-213ENST00000489045 HPS3Q969F9 1004 aa24.87■■□□□ 1.57
COL9A3-213ENST00000489045 CBWD1Q9BRT8 395 aa24.87■■□□□ 1.57
COL9A3-213ENST00000489045 TMEM206Q9H813 350 aa24.87■■□□□ 1.57
COL9A3-213ENST00000489045 RBAKQ9NYW8 714 aaPredicted RBP24.87■■□□□ 1.57
COL9A3-213ENST00000489045 MTMR11A4FU01 709 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 GOLGA8IPA6NC78 632 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 GOLGA8JA6NMD2 632 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 LDHAP00338 332 aaKnown RBP24.86■■□□□ 1.57
COL9A3-213ENST00000489045 CYP4A22Q5TCH4 519 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 CCDC105Q8IYK2 499 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 IQUBQ8NA54 791 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 OR10T2Q8NGX3 314 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 KCNG4Q8TDN1 519 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 NOC3LQ8WTT2 800 aaKnown RBP24.86■■□□□ 1.57
COL9A3-213ENST00000489045 PYM1Q9BRP8 204 aaKnown RBP24.86■■□□□ 1.57
COL9A3-213ENST00000489045 PCIF1Q9H4Z3 704 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 GTF3C3Q9Y5Q9 886 aa24.86■■□□□ 1.57
COL9A3-213ENST00000489045 CYB561D2O14569 222 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 MICAL2O94851 1124 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 MYL4P12829 197 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 ASIC1P78348 528 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 TFAMQ00059 246 aaKnown RBP24.85■■□□□ 1.57
COL9A3-213ENST00000489045 AMPD3Q01432 767 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 PLD1Q13393 1074 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 CENPPQ6IPU0 288 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 PHLDB3Q6NSJ2 640 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 ARMCX5Q6P1M9 558 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 ASAH2Q9NR71 780 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 DSEQ9UL01 958 aa24.85■■□□□ 1.57
COL9A3-213ENST00000489045 EXTL3O43909 919 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 ECI2O75521 394 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 EPHA5P54756 1037 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 SV2CQ496J9 727 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 STXBP4Q6ZWJ1 553 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 TTC9BQ8N6N2 239 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 DTWD2Q8NBA8 298 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 ATAD1Q8NBU5 361 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 LEMD2Q8NC56 503 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 ZNF560Q96MR9 790 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 PLA2G2FQ9BZM2 168 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 DNAJC25Q9H1X3 360 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 PCDHA7Q9UN72 937 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 SLC27A5Q9Y2P5 690 aa24.84■■□□□ 1.57
COL9A3-213ENST00000489045 KPNA7A9QM74 516 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 POLR2DO15514 142 aaKnown RBP24.83■■□□□ 1.57
COL9A3-213ENST00000489045 MOSPD3O75425 235 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 FCARP24071 287 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 POLR2BP30876 1174 aaKnown RBP24.83■■□□□ 1.57
COL9A3-213ENST00000489045 ME1P48163 572 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 SNW1Q13573 536 aaKnown RBP24.83■■□□□ 1.57
COL9A3-213ENST00000489045 TANGO2Q6ICL3 276 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 METTL23Q86XA0 190 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 GPD1LQ8N335 351 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 C1orf127Q8N9H9 656 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 ELSPBP1Q96BH3 223 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 BORCS6Q96GS4 357 aa24.83■■□□□ 1.57
COL9A3-213ENST00000489045 ITGB3P05106 788 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 GJA1P17302 382 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 ALDH1A3P47895 512 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 EPHB3P54753 998 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 DNM1Q05193 864 aaKnown RBP24.82■■□□□ 1.56
COL9A3-213ENST00000489045 SLC39A12Q504Y0 691 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 FAM78AQ5JUQ0 283 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 WSCD1Q658N2 575 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 ATL3Q6DD88 541 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 CNNM4Q6P4Q7 775 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 FAM84AQ96KN4 292 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 C7orf25Q9BPX7 421 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 ZCWPW1Q9H0M4 648 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 MAGEF1Q9HAY2 307 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 PDE11AQ9HCR9 933 aa24.82■■□□□ 1.56
COL9A3-213ENST00000489045 SOAT2O75908 522 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 PNPLA4P41247 253 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 CDR1P51861 262 aa24.81■■□□□ 1.56
COL9A3-213ENST00000489045 STARD6P59095 220 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms