RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 CYP39A1Q9NYL5 469 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 BTBD7Q9P203 1132 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 ATXN10Q9UBB4 475 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 SLC9A2Q9UBY0 812 aa8.1□□□□□ -1.11
BEST3-205ENST00000488961 ZMYND8Q9ULU4 1186 aaPredicted RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 MRPL42Q9Y6G3 142 aaKnown RBP8.1□□□□□ -1.11
BEST3-205ENST00000488961 VCANP13611 3396 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 CCT8L1PA6NM43 557 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 GHRP10912 638 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 KCNA2P16389 499 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 LMNB1P20700 586 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 CCND1P24385 295 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 PIK3CAP42336 1068 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 CDH8P55286 799 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 RPL7AP62424 266 aaKnown RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 FKBP1AP62942 108 aaKnown RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 CBX3Q13185 183 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 SLC29A2Q14542 456 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 GKAP1Q5VSY0 366 aaPredicted RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 TDRD10Q5VZ19 366 aaKnown RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 TXNRD3NBQ6F5E7 133 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 STXBP4Q6ZWJ1 553 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 INTS8Q75QN2 995 aaKnown RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 FBXO16Q8IX29 292 aaPredicted RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 TEX9Q8N6V9 391 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 PRELID2Q8N945 189 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 GLIS1Q8NBF1 620 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 AGBL3Q8NEM8 1001 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 FNBP1Q96RU3 617 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 CORO1BQ9BR76 489 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 APOBEC3GQ9HC16 384 aaKnown RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 RAB20Q9NX57 234 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 UTP11Q9Y3A2 253 aaKnown RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 PCDHB4Q9Y5E5 795 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 SUPT3HO75486 399 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 ARIH2O95376 493 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 HLA-DRAP01903 254 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 RARAP10276 462 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 ATF7P17544 494 aaPredicted RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 CHKAP35790 457 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 PDE6CP51160 858 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 TFAMQ00059 246 aaKnown RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 ZNF268Q14587 947 aaPredicted RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 EMC2Q15006 297 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 P3H1Q32P28 736 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 HSDL1Q3SXM5 330 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 KCNT1Q5JUK3 1230 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 DPY19L2Q6NUT2 758 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 EMBQ6PCB8 327 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 ZNF572Q7Z3I7 529 aaPredicted RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 FAM83AQ86UY5 434 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 LCA5Q86VQ0 697 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 VSIG10LQ86VR7 867 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 MCF2L2Q86YR7 1114 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 JAMLQ86YT9 394 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 HELQQ8TDG4 1101 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 ATP8B4Q8TF62 1192 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 RAPGEF5Q92565 580 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 MTMR12Q9C0I1 747 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 KIAA1683Q9H0B3 1180 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 AZI2Q9H6S1 392 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 CYP26B1Q9NR63 512 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 TUBGCP4Q9UGJ1 667 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 DAAM1Q9Y4D1 1078 aa8.09□□□□□ -1.11
BEST3-205ENST00000488961 RANBP2P49792 3224 aaKnown RBP8.09□□□□□ -1.11
BEST3-205ENST00000488961 ANKRD62A6NC57 917 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 TMEM221A6NGB7 291 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 SPDYE16A6NNV3 312 aaPredicted RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 CTNND1O60716 968 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 TMEM253P0C7T8 217 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 SPATA31D3P0C874 917 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 ALADP13716 330 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 NQO1P15559 274 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 ALOX15P16050 662 aaPredicted RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 CCND2P30279 289 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 CLCN3P51790 818 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 GPC5P78333 572 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 CYP24A1Q07973 514 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 VGLL4Q14135 290 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 BTG3Q14201 252 aaPredicted RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 GLE1Q53GS7 698 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 RAB6CQ53S08 254 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 KRT39Q6A163 491 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 SPATA31D4Q6ZUB0 917 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 LMNTD2Q8IXW0 634 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 RNF168Q8IYW5 571 aaPredicted RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 FBXL13Q8NEE6 735 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 DHRS1Q96LJ7 313 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 NT5C1BQ96P26 610 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 MSTO1Q9BUK6 570 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 STRA6Q9BX79 667 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 BRD8Q9H0E9 1235 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 RAB6CQ9H0N0 254 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 CXCL16Q9H2A7 254 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 NOCTQ9UK39 431 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 MGAMO43451 1857 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 HNRNPRO43390 633 aaKnown RBP8.08□□□□□ -1.12
BEST3-205ENST00000488961 THAP12O43422 761 aa8.08□□□□□ -1.12
BEST3-205ENST00000488961 E2F6O75461 281 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms