RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 LAMA3Q16787 3333 aa5.73□□□□□ -1.49
SF3A3-207ENST00000488934 SIP14410 1827 aa5.73□□□□□ -1.49
SF3A3-207ENST00000488934 IGSF9BQ9UPX0 1349 aa5.73□□□□□ -1.49
SF3A3-207ENST00000488934 TET1Q8NFU7 2136 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 SMIM35A0A1B0GVV1 85 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 SSU72P8A0A1W2PR75 194 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-207ENST00000488934 MAGEB2O15479 319 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 NEMFO60524 1076 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 LRRN2O75325 713 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 PSMD10O75832 226 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 UBOX5O94941 541 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 TDP2O95551 362 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 CCNE2O96020 404 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 AMHP03971 560 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 FDPSP14324 419 aaKnown RBP5.72□□□□□ -1.49
SF3A3-207ENST00000488934 INSRRP14616 1297 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 TRAPPC10P48553 1259 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 HK2P52789 917 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 EPHB4P54760 987 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 CDC42EP1Q00587 391 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 CHRNEQ04844 493 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 CLCQ05315 142 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 PPP2R5CQ13362 524 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 COL9A2Q14055 689 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-207ENST00000488934 PLCB4Q15147 1175 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 TRIM71Q2Q1W2 868 aaKnown RBP5.72□□□□□ -1.49
SF3A3-207ENST00000488934 ZNF618Q5T7W0 954 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 KRT40Q6A162 431 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 SWSAP1Q6NVH7 229 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 MIER3Q7Z3K6 550 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 SPPL2CQ8IUH8 684 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 CCDC60Q8IWA6 550 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-207ENST00000488934 LILRA2Q8N149 483 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 DEFB123Q8N688 67 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 PDZD8Q8NEN9 1154 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 ABHD4Q8TB40 342 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 NEK9Q8TD19 979 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 TIFAQ96CG3 184 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 FAM84AQ96KN4 292 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 DHRS1Q96LJ7 313 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 MBOAT7Q96N66 472 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 FERD3LQ96RJ6 166 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 CTAGE1Q96RT6 745 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 MAP7D2Q96T17 732 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 JPH2Q9BR39 696 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-207ENST00000488934 FTHL17Q9BXU8 183 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 IFIH1Q9BYX4 1025 aaKnown RBP5.72□□□□□ -1.49
SF3A3-207ENST00000488934 FOXP1Q9H334 677 aaPredicted RBP5.72□□□□□ -1.49
SF3A3-207ENST00000488934 BCAS3Q9H6U6 928 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 SLC28A3Q9HAS3 691 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 NOL7Q9UMY1 257 aaKnown RBP5.72□□□□□ -1.49
SF3A3-207ENST00000488934 PCDHA2Q9Y5H9 948 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 PCDHA11Q9Y5I1 949 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 SQORQ9Y6N5 450 aa5.72□□□□□ -1.49
SF3A3-207ENST00000488934 ARID2Q68CP9 1835 aa5.71□□□□□ -1.49
SF3A3-207ENST00000488934 RALGAPA2Q2PPJ7 1873 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 KRTAP9-6A0A140TA67 174 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 FITM1A5D6W6 292 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 BTBD18B2RXH4 712 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 LAD1O00515 517 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 CHMP2AO43633 222 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 JAK2O60674 1132 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 NBNO60934 754 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 NME1P15531 152 aaKnown RBP5.71□□□□□ -1.5
SF3A3-207ENST00000488934 ENDOUP21128 410 aaKnown RBP5.71□□□□□ -1.5
SF3A3-207ENST00000488934 KLRC1P26715 233 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 DNM2P50570 870 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 PSMC5P62195 406 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 IGBP1P78318 339 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 MRPS6P82932 125 aaKnown RBP5.71□□□□□ -1.5
SF3A3-207ENST00000488934 ZNF200P98182 395 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-207ENST00000488934 PRKCEQ02156 737 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 CALCRLQ16602 461 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 MLANAQ16655 118 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 TMEM266Q2M3C6 531 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 PLEKHG4Q58EX7 1191 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 XKR3Q5GH77 459 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 RALGPS1Q5JS13 557 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 RNF111Q6ZNA4 994 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 TSHZ1Q6ZSZ6 1077 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 C16orf59Q7L2K0 433 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 ZNF655Q8N720 491 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-207ENST00000488934 FBXO18Q8NFZ0 1043 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 ETNPPLQ8TBG4 499 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 EAF1Q96JC9 268 aaPredicted RBP5.71□□□□□ -1.5
SF3A3-207ENST00000488934 PPP1R16BQ96T49 567 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 PCYT2Q99447 389 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 KRTAP4-12Q9BQ66 201 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 RAB34Q9BZG1 259 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 MKRN2Q9H000 416 aaKnown RBP5.71□□□□□ -1.5
SF3A3-207ENST00000488934 UNC45AQ9H3U1 944 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 KCNMB3Q9NPA1 279 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 C19orf73Q9NVV2 129 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 GABBR1Q9UBS5 961 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 PCDHA12Q9UN75 941 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 TRPV2Q9Y5S1 764 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 PTPRSQ13332 1948 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 COL4A6Q14031 1691 aa5.71□□□□□ -1.5
SF3A3-207ENST00000488934 KDM3AQ9Y4C1 1321 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms