RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 GAB3Q8WWW8 586 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 PCDH18Q9HCL0 1135 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 AKAP11Q9UKA4 1901 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 POTEFA5A3E0 1075 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 CAPN8A6NHC0 703 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 PDGFRBP09619 1106 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 POTEIP0CG38 1075 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 ETS1P14921 441 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 PSMC6P62333 389 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 PPP2R5EQ16537 467 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 POTEGQ6S5H5 508 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 POTEEQ6S8J3 1075 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 SEPT12Q8IYM1 358 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 C7orf43Q8WVR3 580 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 DGCR14Q96DF8 476 aaKnown RBP17.07■□□□□ 0.32
MCF2L-229ENST00000488765 CRNKL1Q9BZJ0 848 aaKnown RBP17.07■□□□□ 0.32
MCF2L-229ENST00000488765 TLE6Q9H808 572 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 TMOD2Q9NZR1 351 aa17.07■□□□□ 0.32
MCF2L-229ENST00000488765 PEX1O43933 1283 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 CIB2O75838 187 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 CLPTM1O96005 669 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 LDHBP07195 334 aaKnown RBP17.06■□□□□ 0.32
MCF2L-229ENST00000488765 SOX5P35711 763 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 ARL4CP56559 192 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 SLC25A3Q00325 362 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 PPIDQ08752 370 aaKnown RBP17.06■□□□□ 0.32
MCF2L-229ENST00000488765 COG2Q14746 738 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 SF3B3Q15393 1217 aaKnown RBP17.06■□□□□ 0.32
MCF2L-229ENST00000488765 B3GNT6Q6ZMB0 384 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 RNF111Q6ZNA4 994 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 CNBD2Q96M20 576 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 DCP1AQ9NPI6 582 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-229ENST00000488765 ADAMTS6Q9UKP5 1117 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 LZTS1Q9Y250 596 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 FRMPD2Q68DX3 1309 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-229ENST00000488765 CCDC195A0A1B0GUA6 201 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 DCAF8L1A6NGE4 600 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 H0YIN7 160 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 PLA2G4BP0C869 781 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 MAGEA4P43358 317 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 CYP2J2P51589 502 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 C16orf72Q14CZ0 275 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 RASA2Q15283 850 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 PCNX4Q63HM2 1172 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 SAPCD2Q86UD0 394 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 NLRX1Q86UT6 975 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 REXO1Q8N1G1 1221 aaKnown RBP17.06■□□□□ 0.32
MCF2L-229ENST00000488765 GLIS1Q8NBF1 620 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 SNF8Q96H20 258 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 CEP63Q96MT8 703 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 PRPF18Q99633 342 aaKnown RBP17.06■□□□□ 0.32
MCF2L-229ENST00000488765 PLVAPQ9BX97 442 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 TRIM55Q9BYV6 548 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 KLHL11Q9NVR0 708 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 NUP98P52948 1817 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 LRP6O75581 1613 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 LAMB4A4D0S4 1761 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 LAD1O00515 517 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 ZWINTO95229 277 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 ZNF362Q5T0B9 420 aaPredicted RBP17.06■□□□□ 0.32
MCF2L-229ENST00000488765 TRMT1LQ7Z2T5 733 aaKnown RBP17.06■□□□□ 0.32
MCF2L-229ENST00000488765 SFR1Q86XK3 245 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 TCP10LQ8TDR4 215 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 CSRNP1Q96S65 589 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 NYXQ9GZU5 481 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 GMEB1Q9Y692 573 aa17.06■□□□□ 0.32
MCF2L-229ENST00000488765 ADGRA3Q8IWK6 1321 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 A0A0A6YYK5 440 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-229ENST00000488765 GCNT3O95395 438 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 OXCT1P55809 520 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 CD300CQ08708 224 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 MSLNQ13421 630 aaPredicted RBP17.05■□□□□ 0.32
MCF2L-229ENST00000488765 MYLK3Q32MK0 819 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 TMEM53Q6P2H8 277 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 ZFPM1Q8IX07 1006 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 ULK2Q8IYT8 1036 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 DENND1AQ8TEH3 1009 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 GDPD5Q8WTR4 605 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 SLC35C1Q96A29 364 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 MRPL1Q9BYD6 325 aaKnown RBP17.05■□□□□ 0.32
MCF2L-229ENST00000488765 KAT6AQ92794 2004 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 NUP188Q5SRE5 1749 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 LMNB1P20700 586 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 BGNP21810 368 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 GTF2H1P32780 548 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 EMP3P54852 163 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 CYP4A11Q02928 519 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 CBWD6Q4V339 395 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 CBWD3Q5JTY5 395 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 CBWD5Q5RIA9 395 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 IZUMO3Q5VZ72 239 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 CPNE9Q8IYJ1 553 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 SLC7A5P1Q8MH63 180 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 NEU2Q9Y3R4 380 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 COL4A1P02462 1669 aa17.05■□□□□ 0.32
MCF2L-229ENST00000488765 C15orf38-AP3S2A0A0A6YYH1 394 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 TFAP2AP05549 437 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 GCAP28676 217 aa17.04■□□□□ 0.32
MCF2L-229ENST00000488765 MSX2P35548 267 aaPredicted RBP17.04■□□□□ 0.32
MCF2L-229ENST00000488765 MTTPP55157 894 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms