RNA–Protein interactions for RNA: ENST00000488320.1

COL17A1-207, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 626 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-207ENST00000488320 OSTNP61366 133 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 SOX4Q06945 474 aaPredicted RBP10.15□□□□□ -0.78
COL17A1-207ENST00000488320 DUSP4Q13115 394 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 RUNX3Q13761 415 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 COL28A1Q2UY09 1125 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 ATF7IP2Q5U623 682 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 C11orf74Q86VG3 221 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 PROSER1Q86XN7 944 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 TMC8Q8IU68 726 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 MCPH1Q8NEM0 835 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 RPLP0P6Q8NHW5 317 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 PIGKQ92643 395 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 DDX12PQ92771 950 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 JAKMIP1Q96N16 626 aaKnown RBP10.15□□□□□ -0.78
COL17A1-207ENST00000488320 HSD17B14Q9BPX1 270 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 NUSAP1Q9BXS6 441 aaKnown RBP10.15□□□□□ -0.78
COL17A1-207ENST00000488320 LRRC3Q9BY71 257 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 TOPORSQ9NS56 1045 aaPredicted RBP10.15□□□□□ -0.78
COL17A1-207ENST00000488320 KCNJ14Q9UNX9 436 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 SLC27A5Q9Y2P5 690 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 GPSM3Q9Y4H4 160 aa10.15□□□□□ -0.78
COL17A1-207ENST00000488320 DSPP15924 2871 aaKnown RBP10.15□□□□□ -0.79
COL17A1-207ENST00000488320 NID2Q14112 1375 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 SMG1Q96Q15 3661 aaKnown RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 TRDMT1O14717 391 aaKnown RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 MEFVO15553 781 aaPredicted RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 XRCC6P12956 609 aaKnown RBP eCLIP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 DRD1P21728 446 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 PDIA3P30101 505 aaKnown RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 RPL9P32969 192 aaKnown RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 GALK1P51570 392 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 LMAN2Q12907 356 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 DMC1Q14565 340 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 CPLX2Q6PUV4 134 aaKnown RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 PIK3AP1Q6ZUJ8 805 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 DNAJB7Q7Z6W7 309 aaPredicted RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 CHCHD4Q8N4Q1 142 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 SUSD3Q96L08 255 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 TBC1D32Q96NH3 1257 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 GCNAQ96QF7 691 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 EBF3Q9H4W6 596 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 TASP1Q9H6P5 420 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 DAXXQ9UER7 740 aaPredicted RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 ASB3Q9Y575 518 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 NUP210Q8TEM1 1887 aaPredicted RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 DMXL2Q8TDJ6 3036 aa10.14□□□□□ -0.79
COL17A1-207ENST00000488320 ZNF638Q14966 1978 aaKnown RBP10.14□□□□□ -0.79
COL17A1-207ENST00000488320 PCNX2A6NKB5 2137 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 ASCC3Q8N3C0 2202 aaKnown RBP10.13□□□□□ -0.79
COL17A1-207ENST00000488320 MAP3K13O43283 966 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 EDN1P05305 212 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 OR4Q2P0C623 313 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 NAMPTP43490 491 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 ATXN3P54252 364 aaPredicted RBP10.13□□□□□ -0.79
COL17A1-207ENST00000488320 CYP4F8P98187 520 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 YWHAHQ04917 246 aaPredicted RBP10.13□□□□□ -0.79
COL17A1-207ENST00000488320 PPP2R5AQ15172 486 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 TAF12Q16514 161 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 FBXO43Q4G163 708 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 TRIM61Q5EBN2 209 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 PMS2CLQ68D20 193 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 TRIM68Q6AZZ1 485 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 GAREM2Q75VX8 874 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 SYT13Q7L8C5 426 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 USP37Q86T82 979 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 ITIH5Q86UX2 942 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 TTC30AQ86WT1 665 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 HDDC3Q8N4P3 179 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 TSTD1Q8NFU3 115 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 HNRNPLLQ8WVV9 542 aaKnown RBP10.13□□□□□ -0.79
COL17A1-207ENST00000488320 ACDQ96AP0 544 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 IFT74Q96LB3 600 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 AIFM3Q96NN9 605 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 NACC1Q96RE7 527 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 P2RY13Q9BPV8 354 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 TPSD1Q9BZJ3 242 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 SMG9Q9H0W8 520 aaKnown RBP10.13□□□□□ -0.79
COL17A1-207ENST00000488320 DNAJC25Q9H1X3 360 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 FBRSL1Q9HCM7 1045 aaKnown RBP10.13□□□□□ -0.79
COL17A1-207ENST00000488320 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 CIZ1Q9ULV3 898 aaPredicted RBP10.13□□□□□ -0.79
COL17A1-207ENST00000488320 PCDHB8Q9UN66 801 aa10.13□□□□□ -0.79
COL17A1-207ENST00000488320 TIMM13Q9Y5L4 95 aaPredicted RBP10.13□□□□□ -0.79
COL17A1-207ENST00000488320 SETXQ7Z333 2677 aaKnown RBP10.13□□□□□ -0.79
COL17A1-207ENST00000488320 GCN1Q92616 2671 aaKnown RBP10.12□□□□□ -0.79
COL17A1-207ENST00000488320 K7ERI5 159 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 PRAMEF12O95522 483 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 XBP1P17861 261 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 RPS6KB1P23443 525 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 U2AF2P26368 475 aaKnown RBP eCLIP10.12□□□□□ -0.79
COL17A1-207ENST00000488320 GRM5P41594 1212 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 TXKP42681 527 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 SCAPQ12770 1279 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 BFSP1Q12934 665 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 NPY5RQ15761 445 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 CALCRLQ16602 461 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 NT5DC1Q5TFE4 455 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 ARMCX5Q6P1M9 558 aa10.12□□□□□ -0.79
COL17A1-207ENST00000488320 CC2D1AQ6P1N0 951 aaPredicted RBP10.12□□□□□ -0.79
COL17A1-207ENST00000488320 ALKAL1Q6UXT8 129 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms