RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 KIAA0391O15091 583 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 XPOTO43592 962 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 PRDM1O75626 825 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ABLIM3O94929 683 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 PIGRP01833 764 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 MAPTP10636 758 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 MYCLP12524 364 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 RPL17P18621 184 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 MCM4P33991 863 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ARL2P36404 184 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 PTENP60484 403 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 DLX2Q07687 328 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ITGB3BPQ13352 177 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 TUSC3Q13454 348 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 PDGFRLQ15198 375 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF423Q2M1K9 1284 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ZBTB41Q5SVQ8 909 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 UBXN11Q5T124 520 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 PLA2G4DQ86XP0 818 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 MAP4K3Q8IVH8 894 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF276Q8N554 614 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ZSCAN1Q8NBB4 408 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 CPLX3Q8WVH0 158 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 PSPC1Q8WXF1 523 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 LENG9Q96B70 501 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF274Q96GC6 653 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 FAXDC2Q96IV6 333 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 TCF12Q99081 682 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 POLR3CQ9BUI4 534 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 SUV39H2Q9H5I1 410 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 KCNK12Q9HB15 430 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 KCNMB3Q9NPA1 279 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 TBC1D13Q9NVG8 400 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 MARCH5Q9NX47 278 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 TMEM260Q9NX78 707 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ANGPTL2Q9UKU9 493 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 DSEQ9UL01 958 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 BARX2Q9UMQ3 279 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 TNNQ9UQP3 1299 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 TECTAO75443 2155 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 A0A0A0MRY4 1105 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 B4E1Z4 1266 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 YKT6O15498 198 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 NMT2O60551 498 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 IGHDP01880 384 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 CYP11A1P05108 521 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ITGA4P13612 1032 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 TFE3P19532 575 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 CHMLP26374 656 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 PSMA5P28066 241 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 LRPAP1P30533 357 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 GSTT1P30711 240 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC11A1P49279 550 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ATXN1P54253 815 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ANTXR2P58335 489 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 FGD1P98174 961 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF200P98182 395 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 APOBRQ0VD83 1088 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 LMAN2Q12907 356 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ACAP1Q15027 740 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 NECTIN1Q15223 517 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 USH1GQ495M9 461 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 BMP2KLQ5H9B9 411 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 SLC27A1Q6PCB7 646 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 IGF2-ASQ6U949 168 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 GK5Q6ZS86 529 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 CYB5R4Q7L1T6 521 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 EEPD1Q7L9B9 569 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 CACNA2D4Q7Z3S7 1137 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ZNF589Q86UQ0 364 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ITIH5Q86UX2 942 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 DDX42Q86XP3 938 aaKnown RBP eCLIP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 REXO1Q8N1G1 1221 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 CYP2W1Q8TAV3 490 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 ETNPPLQ8TBG4 499 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 GRIN3AQ8TCU5 1115 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 STK35Q8TDR2 534 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 TMEM174Q8WUU8 243 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 OVCA2Q8WZ82 227 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 RMDN1Q96DB5 314 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 TMEM74Q96NL1 305 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 AFF4Q9UHB7 1163 aaKnown RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 GPN3Q9UHW5 284 aaPredicted RBP3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 WASF3Q9UPY6 502 aa3.01□□□□□ -1.93
DEPDC1-203ENST00000488146 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 B2RBV5 119 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 ARNTLO00327 626 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 TRDMT1O14717 391 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 PPFIA3O75145 1194 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 CCNE2O96020 404 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 F13A1P00488 732 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 MCF2P10911 925 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 CEACAM1P13688 526 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 DRD1P21728 446 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 GPC1P35052 558 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 RDXP35241 583 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 NUDT1P36639 197 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 NAMPTP43490 491 aa3□□□□□ -1.93
DEPDC1-203ENST00000488146 QARSP47897 775 aaKnown RBP3□□□□□ -1.93
DEPDC1-203ENST00000488146 ANAPC15P60006 121 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms