RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 GJA4P35212 333 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 CDC42EP1Q00587 391 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 HNRNPUQ00839 825 aaKnown RBP eCLIP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 BNC1Q01954 994 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 GRSF1Q12849 480 aaKnown RBP eCLIP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 NBR1Q14596 966 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 EMC2Q15006 297 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 KARSQ15046 597 aaKnown RBP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 UPP1Q16831 310 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 GAB4Q2WGN9 574 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 USP39Q53GS9 565 aaKnown RBP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 C2orf27AQ580R0 203 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 GPR158Q5T848 1215 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 EMC10Q5UCC4 262 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 LRCH2Q5VUJ6 765 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 TMEM150AQ86TG1 271 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 MICU3Q86XE3 530 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 HDDC3Q8N4P3 179 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 CEP120Q8N960 986 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 FANCBQ8NB91 859 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 TSTD1Q8NFU3 115 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 BAHD1Q8TBE0 780 aaPredicted RBP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 USP33Q8TEY7 942 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 CNOT6LQ96LI5 555 aaKnown RBP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 TCEANC2Q96MN5 208 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 PPP1R10Q96QC0 940 aaKnown RBP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 LPIN3Q9BQK8 851 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 LZTS2Q9BRK4 669 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 IL21Q9HBE4 155 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 DNAAF2Q9NVR5 837 aaKnown RBP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 BARHL2Q9NY43 387 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 KCNK4Q9NYG8 393 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 PCOLCE2Q9UKZ9 415 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 BRPF3Q9ULD4 1205 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 CIZ1Q9ULV3 898 aaPredicted RBP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 BTBD3Q9Y2F9 522 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 GDAQ9Y2T3 454 aa6.47□□□□□ -1.37
COL4A3-206ENST00000487633 UBR5O95071 2799 aaPredicted RBP6.47□□□□□ -1.37
COL4A3-206ENST00000487633 TMEM189-UBE2V1I3L0A0 370 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 ARHGAP33O14559 1287 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 ATG13O75143 517 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 MS4A1P11836 297 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 MAOBP27338 520 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 GABRR2P28476 465 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 JAK3P52333 1124 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 MFAP1P55081 439 aaKnown RBP6.46□□□□□ -1.38
COL4A3-206ENST00000487633 SETQ01105 290 aaPredicted RBP6.46□□□□□ -1.38
COL4A3-206ENST00000487633 TRDNQ13061 729 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 MAPK6Q16659 721 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 LYSMD4Q5XG99 296 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 PDXDC1Q6P996 788 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 SLC27A1Q6PCB7 646 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 C1orf228Q6PIY5 440 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 ANKS3Q6ZW76 656 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 RTL10Q7L3V2 364 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 RALYLQ86SE5 291 aaKnown RBP6.46□□□□□ -1.38
COL4A3-206ENST00000487633 SGMS1Q86VZ5 419 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 IFNLR1Q8IU57 520 aaPredicted RBP6.46□□□□□ -1.38
COL4A3-206ENST00000487633 BOD1L1Q8NFC6 3051 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 PSPC1Q8WXF1 523 aaKnown RBP6.46□□□□□ -1.38
COL4A3-206ENST00000487633 USP13Q92995 863 aaPredicted RBP6.46□□□□□ -1.38
COL4A3-206ENST00000487633 CCDC136Q96JN2 1154 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 CEP170P1Q96L14 293 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 ZMAT2Q96NC0 199 aaKnown RBP6.46□□□□□ -1.38
COL4A3-206ENST00000487633 P2RY13Q9BPV8 354 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 TEKT3Q9BXF9 490 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 TRIM6Q9C030 488 aaPredicted RBP6.46□□□□□ -1.38
COL4A3-206ENST00000487633 ATXN3LQ9H3M9 355 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 PDZD7Q9H5P4 517 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 GPRC5CQ9NQ84 441 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 DIAPH3Q9NSV4 1193 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 RGL1Q9NZL6 768 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 TCEAL9Q9UHQ7 104 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 SLC6A14Q9UN76 642 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 TIMM13Q9Y5L4 95 aaPredicted RBP6.46□□□□□ -1.38
COL4A3-206ENST00000487633 SLCO1B1Q9Y6L6 691 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 MYO9AB2RTY4 2548 aa6.46□□□□□ -1.38
COL4A3-206ENST00000487633 B8ZZF3 427 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 SGK1O00141 431 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 SERPINF2P08697 491 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 AXLP30530 894 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 SFNP31947 248 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 OPRD1P41143 372 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 MCM2P49736 904 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 GNAQP50148 359 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 NFKB2Q00653 900 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 DUSP4Q13115 394 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 CRY1Q16526 586 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 DUOXA1Q1HG43 343 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 CTXN3Q4LDR2 81 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 IQCEQ6IPM2 695 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 PPP1R18Q6NYC8 613 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 NFXL1Q6ZNB6 911 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 LPCAT2Q7L5N7 544 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 DNAJB7Q7Z6W7 309 aaPredicted RBP6.45□□□□□ -1.38
COL4A3-206ENST00000487633 ATAD1Q8NBU5 361 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 BEST2Q8NFU1 509 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 ETNPPLQ8TBG4 499 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 SPIRE2Q8WWL2 714 aa6.45□□□□□ -1.38
COL4A3-206ENST00000487633 BSNDQ8WZ55 320 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms