RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 LEMD2Q8NC56 503 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 SHKBP1Q8TBC3 707 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 ZSCAN18Q8TBC5 510 aaPredicted RBP13.23□□□□□ -0.29
VPS16-208ENST00000487461 DNASE1L2Q92874 299 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 ST6GALNAC4Q9H4F1 302 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 BRD9Q9H8M2 597 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 TRPV4Q9HBA0 871 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 ZNF334Q9HCZ1 680 aaPredicted RBP13.23□□□□□ -0.29
VPS16-208ENST00000487461 FBXO2Q9UK22 296 aaPredicted RBP13.23□□□□□ -0.29
VPS16-208ENST00000487461 STYXL1Q9Y6J8 313 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 F5P12259 2224 aa13.23□□□□□ -0.29
VPS16-208ENST00000487461 NCANO14594 1321 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 MTMR11A4FU01 709 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 SOAT2O75908 522 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 PSMC3P17980 439 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 GDI1P31150 447 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 ABCD1P33897 745 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 EPHB3P54753 998 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 CSTF1Q05048 431 aaKnown RBP13.22□□□□□ -0.29
VPS16-208ENST00000487461 TMEM132DQ14C87 1099 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 ZNF528Q3MIS6 628 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 SLFN12LQ6IEE8 588 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 ARMCX5Q6P1M9 558 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 FAM173BQ6P4H8 233 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 ZC3H14Q6PJT7 736 aaKnown RBP13.22□□□□□ -0.29
VPS16-208ENST00000487461 CRELD2Q6UXH1 353 aaPredicted RBP13.22□□□□□ -0.29
VPS16-208ENST00000487461 DNAJB7Q7Z6W7 309 aaPredicted RBP13.22□□□□□ -0.29
VPS16-208ENST00000487461 SFR1Q86XK3 245 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 TMC8Q8IU68 726 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 GPIHBP1Q8IV16 184 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 TTC9BQ8N6N2 239 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 KRI1Q8N9T8 703 aaKnown RBP13.22□□□□□ -0.29
VPS16-208ENST00000487461 OR10T2Q8NGX3 314 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 CLIC6Q96NY7 704 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 STRA6Q9BX79 667 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 ASB7Q9H672 318 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 FBXO4Q9UKT5 387 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 AGO2Q9UKV8 859 aaKnown RBP13.22□□□□□ -0.29
VPS16-208ENST00000487461 DERAQ9Y315 318 aa13.22□□□□□ -0.29
VPS16-208ENST00000487461 SRPRBQ9Y5M8 271 aaKnown RBP13.22□□□□□ -0.29
VPS16-208ENST00000487461 A0A1W2PRU2 124 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 MYMKA6NI61 221 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 HEPACAM2A8MVW5 462 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 MAN2B1O00754 1011 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 NCAM2O15394 837 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 CYP11A1P05108 521 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 ODC1P11926 461 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 PAX3P23760 479 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 ADSSP30520 456 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 MAGEA9P43362 315 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 RPS9P46781 194 aaKnown RBP13.21□□□□□ -0.29
VPS16-208ENST00000487461 ALDH1A3P47895 512 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 CDR1P51861 262 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 KCNA1Q09470 495 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 RESTQ13127 1097 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 PLD1Q13393 1074 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 RRAGBQ5VZM2 374 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 MFSD6LQ8IWD5 586 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 SUMF1Q8NBK3 374 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 IRF7Q92985 503 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 RSPRY1Q96DX4 576 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 GPR88Q9GZN0 384 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 TRPV5Q9NQA5 729 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 DPP3Q9NY33 737 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 CCDC39Q9UFE4 941 aa13.21□□□□□ -0.29
VPS16-208ENST00000487461 MRPS17Q9Y2R5 130 aaKnown RBP13.21□□□□□ -0.29
VPS16-208ENST00000487461 GPR179Q6PRD1 2367 aa13.21□□□□□ -0.3
VPS16-208ENST00000487461 CYB561D2O14569 222 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 ZNF263O14978 683 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 PPP1R37O75864 691 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 PDCP20941 246 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 SYT1P21579 422 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 CEBPZQ03701 1054 aaKnown RBP13.2□□□□□ -0.3
VPS16-208ENST00000487461 MTAPQ13126 283 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 STXBP5Q5T5C0 1151 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 TSSK4Q6SA08 328 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 GAREM2Q75VX8 874 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 LRRTM3Q86VH5 581 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 EFCAB13Q8IY85 973 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 DCLK2Q8N568 766 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 ZSWIM2Q8NEG5 633 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 DEPDC1BQ8WUY9 529 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 POMGNT1Q8WZA1 660 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 PSMG2Q969U7 264 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 DNAJC19Q96DA6 116 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 BORCS6Q96GS4 357 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 PANK2Q9BZ23 570 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 ZCWPW1Q9H0M4 648 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 SLITRK6Q9H5Y7 841 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 TBC1D7Q9P0N9 293 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 STK17AQ9UEE5 414 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 NDRG2Q9UN36 371 aaKnown RBP13.2□□□□□ -0.3
VPS16-208ENST00000487461 C2CD2Q9Y426 696 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 ASB3Q9Y575 518 aa13.2□□□□□ -0.3
VPS16-208ENST00000487461 OTOGLQ3ZCN5 2332 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 MIA3Q5JRA6 1907 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 ARNTLO00327 626 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 KINO60870 393 aaKnown RBP13.19□□□□□ -0.3
VPS16-208ENST00000487461 ID4P47928 161 aa13.19□□□□□ -0.3
VPS16-208ENST00000487461 TAF6P49848 677 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms