RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 VARSP26640 1264 aaKnown RBP7.77□□□□□ -1.17
UBE4B-209ENST00000487244 LRPAP1P30533 357 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 ABCD1P33897 745 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 MCM4P33991 863 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 SYKP43405 635 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 AMPD3Q01432 767 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 ALCAMQ13740 583 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 CBX2Q14781 532 aaPredicted RBP7.77□□□□□ -1.17
UBE4B-209ENST00000487244 TMEM132DQ14C87 1099 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 PSMD5Q16401 504 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 TMEM259Q4ZIN3 620 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 SLFN12LQ6IEE8 588 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.77□□□□□ -1.17
UBE4B-209ENST00000487244 UNC13DQ70J99 1090 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 NELFCDQ8IXH7 590 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 SYCP3Q8IZU3 236 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 GJD3Q8N144 294 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 KIAA0895Q8NCT3 520 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 NOC3LQ8WTT2 800 aaKnown RBP7.77□□□□□ -1.17
UBE4B-209ENST00000487244 SCFD1Q8WVM8 642 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 PIK3R5Q8WYR1 880 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 LRRC27Q9C0I9 530 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 POMKQ9H5K3 350 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 SLC39A2Q9NP94 309 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 FNIP2Q9P278 1114 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 EXOC7Q9UPT5 735 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 TECTAO75443 2155 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 PTPRJQ12913 1337 aa7.77□□□□□ -1.17
UBE4B-209ENST00000487244 PVALEFA0A1B0GWK0 134 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 J3QL48 77 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 EIF3DO15371 548 aaKnown RBP eCLIP7.76□□□□□ -1.17
UBE4B-209ENST00000487244 GLUD1P00367 558 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 HOXB8P17481 243 aaPredicted RBP7.76□□□□□ -1.17
UBE4B-209ENST00000487244 GARTP22102 1010 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 RPL9P32969 192 aaKnown RBP7.76□□□□□ -1.17
UBE4B-209ENST00000487244 OR1D2P34982 312 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 NUCB2P80303 420 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 ELAVL2Q12926 359 aaKnown RBP7.76□□□□□ -1.17
UBE4B-209ENST00000487244 STK4Q13043 487 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 KYAT1Q16773 422 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 SPATA1Q5VX52 437 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 C9orf57Q5W0N0 161 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 ARMCX5Q6P1M9 558 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 LILRA6Q6PI73 481 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 PPFIBP1Q86W92 1011 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 CBWD2Q8IUF1 395 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 BRSK2Q8IWQ3 736 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 ZNF507Q8TCN5 953 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 RPGRIP1Q96KN7 1286 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 SUSD3Q96L08 255 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 ADAM7Q9H2U9 754 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 SFXN1Q9H9B4 322 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 PDE11AQ9HCR9 933 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 AGPAT3Q9NRZ7 376 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 DZANK1Q9NVP4 752 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 RBAKQ9NYW8 714 aaPredicted RBP7.76□□□□□ -1.17
UBE4B-209ENST00000487244 MTRRQ9UBK8 725 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 PRKAG3Q9UGI9 489 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 UBQLN1Q9UMX0 589 aaKnown RBP7.76□□□□□ -1.17
UBE4B-209ENST00000487244 FAM50BQ9Y247 325 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 SSX2IPQ9Y2D8 614 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 NUB1Q9Y5A7 615 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 TIMM13Q9Y5L4 95 aaPredicted RBP7.76□□□□□ -1.17
UBE4B-209ENST00000487244 CDY1Q9Y6F8 540 aa7.76□□□□□ -1.17
UBE4B-209ENST00000487244 ANO9A1A5B4 782 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 LOC730098B7Z3J9 87 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 CLIC2O15247 247 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 SIAH2O43255 324 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 TRAPPC3O43617 180 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 EXTL3O43909 919 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 TBC1D4O60343 1298 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 ZNF202O95125 648 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 RPN1P04843 607 aaKnown RBP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 CYP3A5P20815 502 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 AARSP49588 968 aaKnown RBP eCLIP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 CYP2J2P51589 502 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 CDR1P51861 262 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 TFAMQ00059 246 aaKnown RBP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 ITIH3Q06033 890 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 DPYDQ12882 1025 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 POSTNQ15063 836 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 BMT2Q1RMZ1 405 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 LMBRD2Q68DH5 695 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 CES5AQ6NT32 575 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 KRBA2Q6ZNG9 492 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 STXBP4Q6ZWJ1 553 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 GPR149Q86SP6 731 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 BPHLQ86WA6 291 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 GPR65Q8IYL9 337 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 FMR1NBQ8N0W7 255 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 KREMEN2Q8NCW0 462 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 BEST2Q8NFU1 509 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 ERCC4Q92889 916 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 FOXJ1Q92949 421 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 ZNF707Q96C28 371 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 PYM1Q9BRP8 204 aaKnown RBP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 PHF7Q9BWX1 381 aaPredicted RBP7.75□□□□□ -1.17
UBE4B-209ENST00000487244 ASB7Q9H672 318 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 EPHX3Q9H6B9 360 aa7.75□□□□□ -1.17
UBE4B-209ENST00000487244 TMEM206Q9H813 350 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms