RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 ANTXRLA6NF34 631 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 ERVH48-1M5A8F1 160 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 TLX3O43711 291 aaPredicted RBP13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 CBFA2T3O75081 653 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 ATXN1LP0C7T5 689 aaKnown RBP13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 SEMG2Q02383 582 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 MBTD1Q05BQ5 628 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 LY6DQ14210 128 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 PCBP1Q15365 356 aaKnown RBP eCLIP13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 ARHGAP15Q53QZ3 475 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 PEAR1Q5VY43 1037 aaPredicted RBP13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 RNF19BQ6ZMZ0 732 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 GAREM2Q75VX8 874 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 GLRX5Q86SX6 157 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 FANCBQ8NB91 859 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 C3orf58Q8NDZ4 430 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 TCP11Q8WWU5 503 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 SLC5A5Q92911 643 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 GLT8D2Q9H1C3 349 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 PRDM16Q9HAZ2 1276 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 NXF1Q9UBU9 619 aaKnown RBP13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 PCOLCE2Q9UKZ9 415 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 SRPK3Q9UPE1 567 aa13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 U3KPZ7 1027 aaPredicted RBP13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 V9GY48 417 aaPredicted RBP13.44□□□□□ -0.26
ATPAF1-205ENST00000487193 TSC2P49815 1807 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 ARID2Q68CP9 1835 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 H7C4K7 107 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 TMEM189-UBE2V1I3L0A0 370 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 PLK4O00444 970 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 GJB3O75712 270 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 HLA-EP13747 358 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 HOXD12P35452 270 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 PTPN13Q12923 2485 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 CTXN3Q4LDR2 81 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 CCDC157Q569K6 752 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 LMBRD2Q68DH5 695 aaPredicted RBP13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 CASC1Q6TDU7 716 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 TEX2Q8IWB9 1127 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 EXOC8Q8IYI6 725 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 CD101Q93033 1021 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 CCDC136Q96JN2 1154 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 IL25Q9H293 177 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 DHX33Q9H6R0 707 aaKnown RBP13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 GOLGA2P5Q9HBQ8 144 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 KCNK4Q9NYG8 393 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 BCCIPQ9P287 314 aaKnown RBP eCLIP13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 AFF4Q9UHB7 1163 aaKnown RBP13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 IL17BQ9UHF5 180 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 YIPF1Q9Y548 306 aa13.43□□□□□ -0.26
ATPAF1-205ENST00000487193 A0A1B0GUA9 196 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 RECQL4O94761 1208 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 ALDH1A2O94788 518 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 CPB1P15086 417 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 GABRR2P28476 465 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 GJA4P35212 333 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 EPHB3P54753 998 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 PSMC5P62195 406 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 CYP4F8P98187 520 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 UPP1Q16831 310 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 GLRA4Q5JXX5 417 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 SPDYCQ5MJ68 293 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 TMEM92Q6UXU6 159 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 PRICKLE2Q7Z3G6 844 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 MB21D2Q8IYB1 491 aaPredicted RBP13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 PGBD3Q8N328 593 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 RDM1Q8NG50 284 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 EXOC6Q8TAG9 804 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 EXOC4Q96A65 974 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 TRIM4Q9C037 500 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 DNAJC25Q9H1X3 360 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 TOR4AQ9NXH8 423 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 BARHL2Q9NY43 387 aa13.42□□□□□ -0.26
ATPAF1-205ENST00000487193 COL6A6A6NMZ7 2263 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 AP5Z1O43299 807 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 PSMD10O75832 226 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 C6P13671 934 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 HNRNPLP14866 589 aaKnown RBP eCLIP13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 CIITAP33076 1130 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 RFC5P40937 340 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 IL12RB1P42701 662 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 RPL6Q02878 288 aaKnown RBP13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 CYP4A11Q02928 519 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 TFDP1Q14186 410 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 EMC2Q15006 297 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 CRY1Q16526 586 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 PLEKHG6Q3KR16 790 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 RABEPKQ7Z6M1 372 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 USP33Q8TEY7 942 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 PGLYRP2Q96PD5 576 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 TASP1Q9H6P5 420 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 TBX20Q9UMR3 447 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 GDAQ9Y2T3 454 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
ATPAF1-205ENST00000487193 CNTNAP5Q8WYK1 1306 aa13.4□□□□□ -0.26
ATPAF1-205ENST00000487193 MGAQ8IWI9 3026 aa13.4□□□□□ -0.26
ATPAF1-205ENST00000487193 PRC1O43663 620 aa13.4□□□□□ -0.26
ATPAF1-205ENST00000487193 ZNF33AQ06730 810 aa13.4□□□□□ -0.26
ATPAF1-205ENST00000487193 MRPL58Q14197 206 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms