RNA–Protein interactions for RNA: ENST00000486995.5

PTCD2-204, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 2,648 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-204ENST00000486995 MSCO60682 206 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 MAFO75444 373 aaPredicted RBP13.07□□□□□ -0.32
PTCD2-204ENST00000486995 ZBTB7AO95365 584 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 VIMP08670 466 aaKnown RBP13.07□□□□□ -0.32
PTCD2-204ENST00000486995 KRT10P13645 584 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 STAT5BP51692 787 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 ZNF252P-AS1Q0IIN9 211 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 SF3A3Q12874 501 aaKnown RBP eCLIP13.07□□□□□ -0.32
PTCD2-204ENST00000486995 ITIH4Q14624 930 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 LRRC14Q15048 493 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 SH3D19Q5HYK7 790 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 NOL9Q5SY16 702 aaKnown RBP13.07□□□□□ -0.32
PTCD2-204ENST00000486995 IZUMO3Q5VZ72 239 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 ZPBP2Q6X784 338 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 RELL1Q8IUW5 271 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 BBOF1Q8ND07 529 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 TRPM4Q8TD43 1214 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 FAM212AQ96EL1 285 aa13.07□□□□□ -0.32
PTCD2-204ENST00000486995 ELAC2Q9BQ52 826 aaKnown RBP13.07□□□□□ -0.32
PTCD2-204ENST00000486995 GHRP10912 638 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 CETPP11597 493 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 HIBCHQ6NVY1 386 aaPredicted RBP13.06□□□□□ -0.32
PTCD2-204ENST00000486995 ZBTB33Q86T24 672 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 WDR49Q8IV35 697 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 RCOR2Q8IZ40 523 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 CYP4X1Q8N118 509 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 ANKS4BQ8N8V4 417 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 SLITRK1Q96PX8 696 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 SLC40A1Q9NP59 571 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 LIASO43766 372 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 EDNRBP24530 442 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 ATP5DP30049 168 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 BAG6P46379 1132 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 AP3M2P53677 418 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 MYL6P60660 151 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 MPP2Q14168 576 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 TREML2Q5T2D2 321 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 MFSD7Q6UXD7 560 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 LBX2Q6XYB7 198 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 GLIS1Q8NBF1 620 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 IMPG2Q9BZV3 1241 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 MTMR12Q9C0I1 747 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 SAMD15Q9P1V8 674 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 BTBD7Q9P203 1132 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 IVNS1ABPQ9Y6Y0 642 aa13.06□□□□□ -0.32
PTCD2-204ENST00000486995 SSC5DA1L4H1 1573 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 SOWAHBA6NEL2 793 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 F8VP50 259 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 ATP2C2O75185 946 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 TOM1L1O75674 476 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 OGDHQ02218 1023 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 GRM1Q13255 1194 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 PRKG1Q13976 671 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 P3H1Q32P28 736 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 KAZNQ674X7 775 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 GSTA5Q7RTV2 222 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 WDTC1Q8N5D0 677 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 MGARPQ8TDB4 240 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 C9orf72Q96LT7 481 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 FHDC1Q9C0D6 1143 aaPredicted RBP13.05□□□□□ -0.32
PTCD2-204ENST00000486995 PPP1R1BQ9UD71 204 aaPredicted RBP13.05□□□□□ -0.32
PTCD2-204ENST00000486995 LGALS13Q9UHV8 139 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 DNPEPQ9ULA0 475 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 CALB1P05937 261 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 BRD2P25440 801 aaKnown RBP13.05□□□□□ -0.32
PTCD2-204ENST00000486995 TCF7P36402 384 aaPredicted RBP13.05□□□□□ -0.32
PTCD2-204ENST00000486995 ZNF394Q53GI3 561 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 LRRC38Q5VT99 294 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 TXNRD3NBQ6F5E7 133 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.05□□□□□ -0.32
PTCD2-204ENST00000486995 RBM41Q96IZ5 413 aaKnown RBP13.05□□□□□ -0.32
PTCD2-204ENST00000486995 MCEEQ96PE7 176 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 ACO2Q99798 780 aaKnown RBP13.05□□□□□ -0.32
PTCD2-204ENST00000486995 TCHPQ9BT92 498 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 MRPL4Q9BYD3 311 aaKnown RBP13.05□□□□□ -0.32
PTCD2-204ENST00000486995 CISHQ9NSE2 258 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 KLC4Q9NSK0 619 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 GGA3Q9NZ52 723 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 NAALADL1Q9UQQ1 740 aa13.05□□□□□ -0.32
PTCD2-204ENST00000486995 LTBP3Q9NS15 1303 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 ABLIM1O14639 778 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 SNX3O60493 162 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 LSM8O95777 96 aaKnown RBP13.04□□□□□ -0.32
PTCD2-204ENST00000486995 CETN2P41208 172 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 EFNA5P52803 228 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 NEDD9Q14511 834 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 PPP1R15BQ5SWA1 713 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 FAM160B1Q5W0V3 765 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 DRICH1Q6PGQ1 229 aaPredicted RBP13.04□□□□□ -0.32
PTCD2-204ENST00000486995 ZCCHC9Q8N567 271 aaKnown RBP13.04□□□□□ -0.32
PTCD2-204ENST00000486995 SEPT1Q8WYJ6 367 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 RBM15Q96T37 977 aaKnown RBP eCLIP13.04□□□□□ -0.32
PTCD2-204ENST00000486995 KCNK9Q9NPC2 374 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 EURLQ9NYK6 297 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 LOC285556D6RIA3 1793 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 USP2O75604 605 aaPredicted RBP13.04□□□□□ -0.32
PTCD2-204ENST00000486995 TJP3O95049 919 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 KRT1P04264 644 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 ZSCAN5DPP0CG00 497 aa13.04□□□□□ -0.32
PTCD2-204ENST00000486995 SRGAP2CP0DJJ0 459 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms