RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 SURF1Q15526 300 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 MAPK6Q16659 721 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 ARMC9Q7Z3E5 817 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 MDM1Q8TC05 714 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 ZC3H15Q8WU90 426 aaKnown RBP19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 XPO6Q96QU8 1125 aaKnown RBP19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 MPHOSPH6Q99547 160 aaKnown RBP19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 ADAM7Q9H2U9 754 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 CPSF3Q9UKF6 684 aaKnown RBP19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 USTQ9Y2C2 406 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 NEU2Q9Y3R4 380 aa19.08■□□□□ 0.65
PDLIM7-207ENST00000486828 A0A0G2JLL6 359 aaPredicted RBP19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 CALB1P05937 261 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 SRGAP2CP0DJJ0 459 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 MARK3P27448 753 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 ITGA8P53708 1063 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 MYL6P60660 151 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 AUHQ13825 339 aaKnown RBP19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 DUOXA2Q1HG44 320 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 SGSM1Q2NKQ1 1148 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 MFSD5Q6N075 450 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 KCNV1Q6PIU1 500 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 PRRT2Q7Z6L0 340 aaPredicted RBP19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 RNF149Q8NC42 400 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 ZNF784Q8NCA9 323 aaPredicted RBP19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 TRAIPQ9BWF2 469 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 NIF3L1Q9GZT8 377 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 C2orf40Q9H1Z8 148 aa19.08■□□□□ 0.64
PDLIM7-207ENST00000486828 ZBTB42B2RXF5 422 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 IRF6O14896 467 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 GJB6O95452 261 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 SLC25A27O95847 323 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 CHN1P15882 459 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 CD58P19256 250 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 CHKAP35790 457 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 TRIP13Q15645 432 aaPredicted RBP19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 CELF3Q5SZQ8 465 aaKnown RBP19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 C6orf89Q6UWU4 347 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 PLPPR4Q7Z2D5 763 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 OTUD6BQ8N6M0 293 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 DCPSQ96C86 337 aaKnown RBP19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 SCLT1Q96NL6 688 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 SELENOSQ9BQE4 189 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 ASCC2Q9H1I8 757 aaPredicted RBP19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 CISHQ9NSE2 258 aa19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 DDX20Q9UHI6 824 aaKnown RBP19.07■□□□□ 0.64
PDLIM7-207ENST00000486828 TCRBV5S1A1TA0A578 114 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 TMEM191CA6NGB0 347 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 TMEM191BP0C7N4 346 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 ADCY8P40145 1251 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 SSR1P43307 286 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 SLCO1A2P46721 670 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 LIG3P49916 1009 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 QPCTQ16769 361 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 HSDL1Q3SXM5 330 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 SMYD5Q6GMV2 418 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 TRIM50Q86XT4 487 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 MICALL1Q8N3F8 863 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 LRRC71Q8N4P6 559 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 FAM212AQ96EL1 285 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 FGD4Q96M96 766 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 DDX23Q9BUQ8 820 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 R3HDMLQ9H3Y0 253 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 GPBP1L1Q9HC44 474 aaPredicted RBP19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 ANAPC5Q9UJX4 755 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 NOP56O00567 594 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 PROZP22891 400 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 GJC1P36383 396 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 CETN2P41208 172 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 RPL7AP62424 266 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 PLCB4Q15147 1175 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 ANKS1BQ7Z6G8 1248 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 TMEM35BQ8NCS4 154 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 BBOF1Q8ND07 529 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 RBM41Q96IZ5 413 aaKnown RBP19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 ZNF518BQ9C0D4 1074 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 ELP3Q9H9T3 547 aa19.06■□□□□ 0.64
PDLIM7-207ENST00000486828 ADM5C9JUS6 153 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 HOXC6P09630 235 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 NFX1Q12986 1120 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 TRPC3Q13507 836 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 TTC31Q49AM3 519 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 MPZL3Q6UWV2 235 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 TSHZ1Q6ZSZ6 1077 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 ZNF365Q70YC5 407 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 SULF1Q8IWU6 871 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 RCOR2Q8IZ40 523 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 CCDC89Q8N998 374 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 ATXN2LQ8WWM7 1075 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 CHMP6Q96FZ7 201 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 OTUD5Q96G74 571 aa19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 JPH2Q9BR39 696 aaPredicted RBP19.05■□□□□ 0.64
PDLIM7-207ENST00000486828 ACSL3O95573 720 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 TTC4O95801 387 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 PGK2P07205 417 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 DRD4P21917 467 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 CDH5P33151 784 aaPredicted RBP19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 IREB2P48200 963 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 ZNF252P-AS1Q0IIN9 211 aa19.04■□□□□ 0.64
PDLIM7-207ENST00000486828 LRRC38Q5VT99 294 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms