RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 RHDQ02161 417 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 RAB39AQ14964 217 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 ANO6Q4KMQ2 910 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 DARS2Q6PI48 645 aaKnown RBP5.72□□□□□ -1.49
SMC4-218ENST00000486711 GADL1Q6ZQY3 521 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 Q6ZVL8 140 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 MED25Q71SY5 747 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 C11orf96Q7Z7L8 435 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 TMEM132CQ8N3T6 1108 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 SLC44A3Q8N4M1 653 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 SIMC1Q8NDZ2 872 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 KLHDC4Q8TBB5 520 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 CAGE1Q8TC20 777 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 HOXB13Q92826 284 aaPredicted RBP5.72□□□□□ -1.49
SMC4-218ENST00000486711 MTFMTQ96DP5 389 aaKnown RBP5.72□□□□□ -1.49
SMC4-218ENST00000486711 TMX3Q96JJ7 454 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 B3GNT5Q9BYG0 378 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 ZNF700Q9H0M5 742 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 DDX21Q9NR30 783 aaKnown RBP eCLIP5.72□□□□□ -1.49
SMC4-218ENST00000486711 MOCS1Q9NZB8 636 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 TESQ9UGI8 421 aaKnown RBP5.72□□□□□ -1.49
SMC4-218ENST00000486711 PCDHB1Q9Y5F3 818 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 NR2E3Q9Y5X4 410 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 MAST3O60307 1309 aa5.72□□□□□ -1.49
SMC4-218ENST00000486711 ATRNL1Q5VV63 1379 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 ANO9A1A5B4 782 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 HRGP04196 525 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 IL2RBP14784 551 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 ZNF37AP17032 561 aaPredicted RBP5.71□□□□□ -1.5
SMC4-218ENST00000486711 SREBF1P36956 1147 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 MPLP40238 635 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 MAP2K6P52564 334 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 ELLP55199 621 aaPredicted RBP5.71□□□□□ -1.5
SMC4-218ENST00000486711 DSC2Q02487 901 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 ATP2B3Q16720 1220 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 KIAA0753Q2KHM9 967 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 COLEC12Q5KU26 742 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 ZKSCAN2Q63HK3 967 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 TSHZ3Q63HK5 1081 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 NPNTQ6UXI9 565 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 FAM43AQ8N2R8 423 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 SAMD3Q8N6K7 520 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 FAM156AQ8NDB6 213 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 SVIPQ8NHG7 77 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 NSUN6Q8TEA1 469 aaKnown RBP5.71□□□□□ -1.5
SMC4-218ENST00000486711 FAM167AQ96KS9 214 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 RPS6KC1Q96S38 1066 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 MPHOSPH6Q99547 160 aaKnown RBP5.71□□□□□ -1.5
SMC4-218ENST00000486711 POLR3GLQ9BT43 218 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 ALOXE3Q9BYJ1 711 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 RNPEPQ9H4A4 650 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 RSAD1Q9HA92 442 aa5.71□□□□□ -1.5
SMC4-218ENST00000486711 MYBBP1AQ9BQG0 1328 aaKnown RBP5.71□□□□□ -1.5
SMC4-218ENST00000486711 A6NNZ2 444 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 GPR32O75388 356 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 ELANEP08246 267 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 RAP2AP10114 183 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 SMARCA1P28370 1054 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 PLA2G5P39877 138 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 SLC6A9P48067 706 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 SCAPQ12770 1279 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 NOGQ13253 232 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 AFMIDQ63HM1 303 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 GPR149Q86SP6 731 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 KIAA0319LQ8IZA0 1049 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 BOLLQ8N9W6 283 aaKnown RBP5.7□□□□□ -1.5
SMC4-218ENST00000486711 FBXO18Q8NFZ0 1043 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 RAB24Q969Q5 203 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 FUBP1Q96AE4 644 aaKnown RBP5.7□□□□□ -1.5
SMC4-218ENST00000486711 MRI1Q9BV20 369 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 LMBRD1Q9NUN5 540 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 CALCOCO1Q9P1Z2 691 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 TLK1Q9UKI8 766 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 SIK3Q9Y2K2 1263 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 PNPLA7Q6ZV29 1317 aa5.7□□□□□ -1.5
SMC4-218ENST00000486711 A0A1B0GTW7 788 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 H3BUI4 141 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 APAF1O14727 1248 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 TEX33O43247 280 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 MGEA5O60502 916 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 POMCP01189 267 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 ATP5JP18859 108 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 DDCP20711 480 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 NEK3P51956 506 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 AGFG1P52594 562 aaKnown RBP5.69□□□□□ -1.5
SMC4-218ENST00000486711 HK3P52790 923 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 GPSM2P81274 684 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 OCA2Q04671 838 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 TARDBPQ13148 414 aaKnown RBP eCLIP5.69□□□□□ -1.5
SMC4-218ENST00000486711 HNRNPA0Q13151 305 aaKnown RBP5.69□□□□□ -1.5
SMC4-218ENST00000486711 GALEQ14376 348 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 KHDC1Q4VXA5 237 aaKnown RBP5.69□□□□□ -1.5
SMC4-218ENST00000486711 RNF220Q5VTB9 566 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 B3GNTL1Q67FW5 361 aaPredicted RBP5.69□□□□□ -1.5
SMC4-218ENST00000486711 IL31Q6EBC2 164 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 PMM1Q92871 262 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 RNF31Q96EP0 1072 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 Q96MF0 132 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 ZSWIM1Q9BR11 485 aa5.69□□□□□ -1.5
SMC4-218ENST00000486711 DUSP26Q9BV47 211 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms