RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 SND1Q7KZF4 910 aaKnown RBP eCLIP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 ADGRD2Q7Z7M1 963 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 RBM23Q86U06 439 aaKnown RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 ZNF410Q86VK4 478 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 GPBP1Q86WP2 473 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 ECHDC2Q86YB7 292 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 KSR1Q8IVT5 923 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 FAM178BQ8IXR5 827 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 EFCAB13Q8IY85 973 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 LRRC43Q8N309 656 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 MREGQ8N565 214 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 ARFGAP2Q8N6H7 521 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 COLGALT1Q8NBJ5 622 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 FDXACB1Q9BRP7 624 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 C1QTNF1Q9BXJ1 281 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 INO80BQ9C086 356 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 RGL1Q9NZL6 768 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 AIPL1Q9NZN9 384 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 WRAP73Q9P2S5 460 aaPredicted RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 FBXL5Q9UKA1 691 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 INTUQ9ULD6 942 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 PIN4Q9Y237 131 aaKnown RBP9.68□□□□□ -0.86
COL12A1-208ENST00000486533 PCDHGC5Q9Y5F6 944 aa9.68□□□□□ -0.86
COL12A1-208ENST00000486533 ATXN2Q99700 1313 aaKnown RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 A0A0U1RQF3 1178 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 SRRM3A6NNA2 597 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CCDC188H7C350 402 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 MYO1CO00159 1063 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 LINC01565O15544 149 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 SRGAP2O75044 1071 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 TBX10O75333 385 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 SYF2O95926 243 aaKnown RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 ABL1P00519 1130 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 SSBP05455 408 aaKnown RBP eCLIP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 LTBRP36941 435 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 PBX3P40426 434 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 MAGEA9P43362 315 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 NRIP1P48552 1158 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 UBE3AQ05086 875 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 MTMR3Q13615 1198 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CUL1Q13616 776 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 RAPGEF1Q13905 1077 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CTTNQ14247 550 aaKnown RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 EPHA7Q15375 998 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CTC1Q2NKJ3 1217 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 ASTE1Q2TB18 679 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CFAP58Q5T655 872 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 B4GALNT4Q76KP1 1039 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 OTUD6AQ7L8S5 288 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CATSPER4Q7RTX7 472 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 TRIM59Q8IWR1 403 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 TPH2Q8IWU9 490 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 C4orf19Q8IY42 314 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 EXOC8Q8IYI6 725 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 GJD3Q8N144 294 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 HELQQ8TDG4 1101 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 DYDC2Q96IM9 177 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CASD1Q96PB1 797 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 SPAG5Q96R06 1193 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CAPS2Q9BXY5 557 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 EPHX3Q9H6B9 360 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CWH43Q9H720 699 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CD320Q9NPF0 282 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 TLR9Q9NR96 1032 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CAPN6Q9Y6Q1 641 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 ARID2Q68CP9 1835 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 FRMD3A2A2Y4 597 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 RCCD1A6NED2 376 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 EBAG9O00559 213 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 MAP3K7O43318 606 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 PHACTR2O75167 634 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 TBCAO75347 108 aaKnown RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 EOMESO95936 686 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 AFPP02771 609 aaKnown RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 SRGAP2CP0DJJ0 459 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 GGCXP38435 758 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 USP8P40818 1118 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 RFC5P40937 340 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 SPIRE1Q08AE8 756 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 EMC2Q15006 297 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 XKR9Q5GH70 373 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 HERC4Q5GLZ8 1057 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CLLU1OSQ5K130 101 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 KCNT2Q6UVM3 1135 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 PSPC1Q8WXF1 523 aaKnown RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 TMEM143Q96AN5 459 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 LRRC45Q96CN5 670 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 DNAJC19Q96DA6 116 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 ZFRQ96KR1 1074 aaKnown RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CCDC43Q96MW1 224 aaKnown RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 ZNF558Q96NG5 402 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 SH3GL2Q99962 352 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 DHX33Q9H6R0 707 aaKnown RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 TLE6Q9H808 572 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 CHST12Q9NRB3 414 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 RNF19AQ9NV58 838 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 WDR70Q9NW82 654 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 ARMCX3Q9UH62 379 aaPredicted RBP9.67□□□□□ -0.86
COL12A1-208ENST00000486533 DNM3Q9UQ16 869 aa9.67□□□□□ -0.86
COL12A1-208ENST00000486533 PPME1Q9Y570 386 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms