RNA–Protein interactions for RNA: ENST00000486211.1

XRN1-212, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 1,180 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-212ENST00000486211 PTH1RQ03431 593 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 PCBP1Q15365 356 aaKnown RBP eCLIP9.15□□□□□ -0.94
XRN1-212ENST00000486211 ARHGAP29Q52LW3 1261 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 TRIM61Q5EBN2 209 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 FERMT3Q86UX7 667 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 HACE1Q8IYU2 909 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 DAGLBQ8NCG7 672 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 EHBP1Q8NDI1 1231 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 MTA3Q9BTC8 594 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 LRRC3Q9BY71 257 aa9.15□□□□□ -0.94
XRN1-212ENST00000486211 MBD1Q9UIS9 605 aaPredicted RBP9.15□□□□□ -0.94
XRN1-212ENST00000486211 THADAQ6YHU6 1953 aa9.15□□□□□ -0.95
XRN1-212ENST00000486211 SHROOM3Q8TF72 1996 aa9.15□□□□□ -0.95
XRN1-212ENST00000486211 ATG2BQ96BY7 2078 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 CCDC69A6NI79 296 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 hCG_1984214I3L0E3 225 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 TRDMT1O14717 391 aaKnown RBP9.14□□□□□ -0.95
XRN1-212ENST00000486211 ARHGAP6O43182 974 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 SIAH2O43255 324 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 B4GALT5O43286 388 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 NPTXRO95502 500 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 APBB3O95704 486 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 EGFP01133 1207 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 MYL4P12829 197 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 MBTD1Q05BQ5 628 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 STXBP5Q5T5C0 1151 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 LRCH2Q5VUJ6 765 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 NFXL1Q6ZNB6 911 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 ANKS3Q6ZW76 656 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 SYT13Q7L8C5 426 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 MIER3Q7Z3K6 550 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 CDR2LQ86X02 465 aaPredicted RBP9.14□□□□□ -0.95
XRN1-212ENST00000486211 ARID3BQ8IVW6 561 aaPredicted RBP9.14□□□□□ -0.95
XRN1-212ENST00000486211 ZNF713Q8N859 430 aaPredicted RBP9.14□□□□□ -0.95
XRN1-212ENST00000486211 LEMD2Q8NC56 503 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 EXOC6Q8TAG9 804 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 SLC7A3Q8WY07 619 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 PIGKQ92643 395 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 TEKT3Q9BXF9 490 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 TRIM6Q9C030 488 aaPredicted RBP9.14□□□□□ -0.95
XRN1-212ENST00000486211 GPR88Q9GZN0 384 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 CYP4F11Q9HBI6 524 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 TMEM74BQ9NUR3 256 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 PARP2Q9UGN5 583 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 RCAN3Q9UKA8 241 aa9.14□□□□□ -0.95
XRN1-212ENST00000486211 NUP210Q8TEM1 1887 aaPredicted RBP9.13□□□□□ -0.95
XRN1-212ENST00000486211 KIAA1549LQ6ZVL6 1849 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 I3L4J1 428 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 PRC1O43663 620 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 PRKCBP05771 671 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 CD59P13987 128 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 ELF1P32519 619 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 LIFRP42702 1097 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 TWF1Q12792 350 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 GRSF1Q12849 480 aaKnown RBP eCLIP9.13□□□□□ -0.95
XRN1-212ENST00000486211 ITPRIPL2Q3MIP1 535 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 IQCEQ6IPM2 695 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 SLC27A1Q6PCB7 646 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 C11orf74Q86VG3 221 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 TMC8Q8IU68 726 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 PLEKHM2Q8IWE5 1019 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 TMTC2Q8N394 836 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 C3orf58Q8NDZ4 430 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 EZH1Q92800 747 aaPredicted RBP9.13□□□□□ -0.95
XRN1-212ENST00000486211 ZNF512Q96ME7 567 aaPredicted RBP9.13□□□□□ -0.95
XRN1-212ENST00000486211 NUSAP1Q9BXS6 441 aaKnown RBP9.13□□□□□ -0.95
XRN1-212ENST00000486211 LNPKQ9C0E8 428 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 OSBPL3Q9H4L5 887 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 SLITRK6Q9H5Y7 841 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 FBRSL1Q9HCM7 1045 aaKnown RBP9.13□□□□□ -0.95
XRN1-212ENST00000486211 ASAH2Q9NR71 780 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 OBP2AQ9NY56 170 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 WRAP73Q9P2S5 460 aaPredicted RBP9.13□□□□□ -0.95
XRN1-212ENST00000486211 WASF2Q9Y6W5 498 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 PTPRBP23467 1997 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 PCDH15Q96QU1 1955 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 SPTA1P02549 2419 aa9.13□□□□□ -0.95
XRN1-212ENST00000486211 A0A1B0GUA9 196 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 A0A1W2PRU2 124 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 ESYT2A0FGR8 921 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 OTOL1A6NHN0 477 aaPredicted RBP9.12□□□□□ -0.95
XRN1-212ENST00000486211 INO80B-WBP1J3KQ70 363 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 ASAP2O43150 1006 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 PRAMEF12O95522 483 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 THP07101 528 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 FTH1P19P0C7X4 201 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 BRCC3P46736 316 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 DHPSP49366 369 aaPredicted RBP9.12□□□□□ -0.95
XRN1-212ENST00000486211 DGKEP52429 567 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 PSMC5P62195 406 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 SRSF1Q07955 248 aaKnown RBP eCLIP9.12□□□□□ -0.95
XRN1-212ENST00000486211 HNRNPDQ14103 355 aaKnown RBP9.12□□□□□ -0.95
XRN1-212ENST00000486211 DMC1Q14565 340 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 PEAR1Q5VY43 1037 aaPredicted RBP9.12□□□□□ -0.95
XRN1-212ENST00000486211 SLC23A3Q6PIS1 610 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 CASC1Q6TDU7 716 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 HAUS6Q7Z4H7 955 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 MICU3Q86XE3 530 aa9.12□□□□□ -0.95
XRN1-212ENST00000486211 ELMOD1Q8N336 334 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms