RNA–Protein interactions for RNA: ENST00000486124.5

C2-215, Transcript of complement C2, human

TSL 5

Gene C2, Length 2,800 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C2-215	ENST00000486124	CNKSR1	Q969H4	720 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	NAF1	Q96HR8	494 aa	Known RBP	11.2	□□□□□ -0.62
C2-215	ENST00000486124	FBXL18	Q96ME1	805 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	NUDCD1	Q96RS6	583 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	KLF6	Q99612	283 aa	Predicted RBP	11.2	□□□□□ -0.62
C2-215	ENST00000486124	TMEM121	Q9BTD3	319 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	NPHS2	Q9NP85	383 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	FEM1B	Q9UK73	627 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	PCDHB4	Q9Y5E5	795 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	IVNS1ABP	Q9Y6Y0	642 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	UBR3	Q6ZT12	1888 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124		F8VP50	259 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	DNALI1	O14645	258 aa	Predicted RBP	11.2	□□□□□ -0.62
C2-215	ENST00000486124	LIAS	O43766	372 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	EDF1	O60869	148 aa	Known RBP	11.2	□□□□□ -0.62
C2-215	ENST00000486124	PEX11A	O75192	247 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	LYPLA2	O95372	231 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	HLA-DRA	P01903	254 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	ICAM1	P05362	532 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	KRT4	P19013	534 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	GCK	P35557	465 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	RPS6	P62753	249 aa	Known RBP	11.2	□□□□□ -0.62
C2-215	ENST00000486124	PDIA2	Q13087	525 aa	Known RBP	11.2	□□□□□ -0.62
C2-215	ENST00000486124	TAF1B	Q53T94	588 aa	Predicted RBP	11.2	□□□□□ -0.62
C2-215	ENST00000486124	PLEKHG4	Q58EX7	1191 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	LIN9	Q5TKA1	542 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	HHAT	Q5VTY9	493 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	CAPRIN2	Q6IMN6	1127 aa	Known RBP	11.2	□□□□□ -0.62
C2-215	ENST00000486124	LVRN	Q6Q4G3	990 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	OTOA	Q7RTW8	1153 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	MTDH	Q86UE4	582 aa	Known RBP	11.2	□□□□□ -0.62
C2-215	ENST00000486124	FAM160B2	Q86V87	743 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	RELL1	Q8IUW5	271 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	KATNAL2	Q8IYT4	538 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	LRMDA	Q9H2I8	198 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	TBC1D22B	Q9NU19	505 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	PTPRJ	Q12913	1337 aa		11.2	□□□□□ -0.62
C2-215	ENST00000486124	MAGEB2	O15479	319 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	PSTPIP1	O43586	416 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	MYBL1	P10243	752 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	CALB2	P22676	271 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	GNA15	P30679	374 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	ALDH3A1	P30838	453 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	EFTUD2	Q15029	972 aa	Known RBP eCLIP	11.19	□□□□□ -0.62	4e-7	■■□□□ 13.5
C2-215	ENST00000486124	PDK4	Q16654	411 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	TDRD10	Q5VZ19	366 aa	Known RBP	11.19	□□□□□ -0.62
C2-215	ENST00000486124	NLGN1	Q8N2Q7	840 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	SUPT20H	Q8NEM7	779 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	EXD1	Q8NHP7	514 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	FNBP1	Q96RU3	617 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	RNPEPL1	Q9HAU8	725 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	APOBEC3G	Q9HC16	384 aa	Known RBP	11.19	□□□□□ -0.62
C2-215	ENST00000486124	UBN1	Q9NPG3	1134 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	TMOD2	Q9NZR1	351 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	YDJC	A8MPS7	323 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	ZNF862	O60290	1169 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	SMNDC1	O75940	238 aa	Known RBP eCLIP	11.19	□□□□□ -0.62
C2-215	ENST00000486124	GNAZ	P19086	355 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	CHRNA5	P30532	468 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	SSTR1	P30872	391 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	PIK3CA	P42336	1068 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	PTGER2	P43116	358 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	NLRP11	P59045	1033 aa	Known RBP	11.19	□□□□□ -0.62
C2-215	ENST00000486124	NOMO3	P69849	1222 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	MAPK6	Q16659	721 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	WDR72	Q3MJ13	1102 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	SEZ6	Q53EL9	994 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	USP37	Q86T82	979 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	NLRX1	Q86UT6	975 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	SPIRE2	Q8WWL2	714 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	ZNF75CP	Q92670	426 aa	Predicted RBP	11.19	□□□□□ -0.62
C2-215	ENST00000486124	ZBTB45	Q96K62	511 aa	Predicted RBP	11.19	□□□□□ -0.62
C2-215	ENST00000486124	DENND2D	Q9H6A0	471 aa	Predicted RBP	11.19	□□□□□ -0.62
C2-215	ENST00000486124	GABBR1	Q9UBS5	961 aa		11.19	□□□□□ -0.62
C2-215	ENST00000486124	WDR64	B1ANS9	1081 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	SGK1	O00141	431 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	PDHA1	P08559	390 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	ABHD2	P08910	425 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	TPBGL	P0DKB5	382 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	ACO1	P21399	889 aa	Known RBP	11.18	□□□□□ -0.62
C2-215	ENST00000486124	ADRA1D	P25100	572 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	GTF2H1	P32780	548 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	DYNLT1	P63172	113 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	PTP4A2	Q12974	167 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	PARP6	Q2NL67	630 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	ENOSF1	Q7L5Y1	443 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	TAS1R3	Q7RTX0	852 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	ABRA	Q8N0Z2	381 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	C10orf82	Q8WW14	230 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	TRIM11	Q96F44	468 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	RMDN3	Q96TC7	470 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	ZNF341	Q9BYN7	854 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	MRPL47	Q9HD33	250 aa	Known RBP	11.18	□□□□□ -0.62
C2-215	ENST00000486124	ZBTB12	Q9Y330	459 aa	Predicted RBP	11.18	□□□□□ -0.62
C2-215	ENST00000486124	SLX4	Q8IY92	1834 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	ANKRD31	Q8N7Z5	1873 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	PRPF4	O43172	522 aa	Known RBP eCLIP	11.18	□□□□□ -0.62	3e-6	■■□□□ 12
C2-215	ENST00000486124	RAD17	O75943	681 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	VNN1	O95497	513 aa		11.18	□□□□□ -0.62
C2-215	ENST00000486124	KRT1	P04264	644 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms