RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 SURF1Q15526 300 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 PPM1LQ5SGD2 360 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 ZBTB41Q5SVQ8 909 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 LIN9Q5TKA1 542 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 C9orf57Q5W0N0 161 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 JADE1Q6IE81 842 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 UNC13DQ70J99 1090 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 EPM2AIP1Q7L775 607 aaPredicted RBP7.59□□□□□ -1.19
VPS50-218ENST00000485994 FEZF2Q8TBJ5 459 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 CACTINQ8WUQ7 758 aaKnown RBP7.59□□□□□ -1.19
VPS50-218ENST00000485994 POMGNT1Q8WZA1 660 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 BORCS6Q96GS4 357 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 PRRX2Q99811 253 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 SCAND2PQ9GZW5 306 aaPredicted RBP7.59□□□□□ -1.19
VPS50-218ENST00000485994 KCNK12Q9HB15 430 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 PIDD1Q9HB75 910 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 CDH22Q9UJ99 828 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 FBXL5Q9UKA1 691 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 DSEQ9UL01 958 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 CDY1Q9Y6F8 540 aa7.59□□□□□ -1.19
VPS50-218ENST00000485994 WDR27A2RRH5 827 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 EXTL3O43909 919 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 MYBP10242 640 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 ELF1P32519 619 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 MCM4P33991 863 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 HOXD13P35453 343 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 PNPLA4P41247 253 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 ME1P48163 572 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 CASP5P51878 434 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 KRT85P78386 507 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 ROR1Q01973 937 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 YWHAHQ04917 246 aaPredicted RBP7.58□□□□□ -1.2
VPS50-218ENST00000485994 DNM1Q05193 864 aaKnown RBP7.58□□□□□ -1.2
VPS50-218ENST00000485994 TMEM132DQ14C87 1099 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 BMT2Q1RMZ1 405 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 TSR1Q2NL82 804 aaKnown RBP7.58□□□□□ -1.2
VPS50-218ENST00000485994 CTXN3Q4LDR2 81 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 ZNF280DQ6N043 979 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 HFE2Q6ZVN8 426 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 DPH6Q7L8W6 267 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 GLYCTKQ8IVS8 523 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 BRSK2Q8IWQ3 736 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 C12orf56Q8IXR9 622 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 SYCP3Q8IZU3 236 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 SLC44A3Q8N4M1 653 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 FBXL6Q8N531 539 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 CXorf38Q8TB03 319 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 SPATA18Q8TC71 538 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 PBXIP1Q96AQ6 731 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 DHX58Q96C10 678 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 SENP8Q96LD8 212 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 DPP3Q9NY33 737 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 GDE1Q9NZC3 331 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 DNMT3BQ9UBC3 853 aaKnown RBP7.58□□□□□ -1.2
VPS50-218ENST00000485994 WNT16Q9UBV4 365 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 TUBGCP4Q9UGJ1 667 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 HPSEQ9Y251 543 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 HCN4Q9Y3Q4 1203 aa7.58□□□□□ -1.2
VPS50-218ENST00000485994 UBE4BO95155 1302 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 A0A1W2PQ27 194 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 A0A1W2PQ64 194 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 A0A1W2PQD8 194 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 FAM86C2PA6NEL3 165 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 ZNF233A6NK53 670 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 TISP43B9A030 160 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 I3L4J1 428 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 DPYSL4O14531 572 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 ZNF197O14709 1029 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 KLRC4O43908 158 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 PRPF6O94906 941 aaKnown RBP7.57□□□□□ -1.2
VPS50-218ENST00000485994 SEC24AO95486 1093 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 FSHRP23945 695 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 TAF6P49848 677 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 EPHA5P54756 1037 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 MCCD1P59942 119 aaPredicted RBP7.57□□□□□ -1.2
VPS50-218ENST00000485994 SPAG1Q07617 926 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 FAM26FQ5R3K3 315 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 DSTYKQ6XUX3 929 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 LIMS2Q7Z4I7 341 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 GRASPQ7Z6J2 395 aaPredicted RBP7.57□□□□□ -1.2
VPS50-218ENST00000485994 USP37Q86T82 979 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 GPD1LQ8N335 351 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 LRRC52Q8N7C0 313 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 LEMD2Q8NC56 503 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 SLC7A14Q8TBB6 771 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 C2orf15Q8WU43 125 aaKnown RBP7.57□□□□□ -1.2
VPS50-218ENST00000485994 LEO1Q8WVC0 666 aaPredicted RBP7.57□□□□□ -1.2
VPS50-218ENST00000485994 SPATA32Q96LK8 384 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 MYADMQ96S97 322 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 FAM213AQ9BRX8 229 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 FGFBP2Q9BYJ0 223 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 TSHZ2Q9NRE2 1034 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 GDAP2Q9NXN4 497 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 TBC1D7Q9P0N9 293 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 CDH7Q9ULB5 785 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 DUSP12Q9UNI6 340 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 ASB3Q9Y575 518 aa7.57□□□□□ -1.2
VPS50-218ENST00000485994 KPNA7A9QM74 516 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 SPTLC1O15269 473 aa7.56□□□□□ -1.2
VPS50-218ENST00000485994 TGFB1I1O43294 461 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms