RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 KRT19P08727 400 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 SNRPFP62306 86 aaKnown RBP19.87■□□□□ 0.77
COL1A1-206ENST00000485870 PSMD2Q13200 908 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 MTMR3Q13615 1198 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 SNRNP35Q16560 246 aaKnown RBP19.87■□□□□ 0.77
COL1A1-206ENST00000485870 SV2CQ496J9 727 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 SCARA3Q6AZY7 606 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 TRIM67Q6ZTA4 783 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 RTL10Q7L3V2 364 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 TCEAL8Q8IYN2 117 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 CSGALNACT2Q8N6G5 542 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 XXYLT1Q8NBI6 393 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 ANKRD36BP1Q96IX9 119 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 PGLYRP2Q96PD5 576 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 OXCT2Q9BYC2 517 aaPredicted RBP19.87■□□□□ 0.77
COL1A1-206ENST00000485870 SMOC2Q9H3U7 446 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 ITGA11Q9UKX5 1188 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 SORCS3Q9UPU3 1222 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 INSL5Q9Y5Q6 135 aa19.87■□□□□ 0.77
COL1A1-206ENST00000485870 KPNA7A9QM74 516 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 CYP11A1P05108 521 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 POU2F2P09086 479 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 COL9A1P20849 921 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 PNPLA4P41247 253 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 DPYDQ12882 1025 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 BFSP1Q12934 665 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 SURF1Q15526 300 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 METTL23Q86XA0 190 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 OR5B17Q8NGF7 314 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 CCDC47Q96A33 483 aaKnown RBP19.86■□□□□ 0.77
COL1A1-206ENST00000485870 TMEM209Q96SK2 561 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 INTS13Q9NVM9 706 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 DNMT3BQ9UBC3 853 aaKnown RBP19.86■□□□□ 0.77
COL1A1-206ENST00000485870 DSEQ9UL01 958 aa19.86■□□□□ 0.77
COL1A1-206ENST00000485870 NOTCH4Q99466 2003 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 TMEM221A6NGB7 291 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 M0R296 226 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 TNNC2P02585 160 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 DLATP10515 647 aaKnown RBP19.85■□□□□ 0.77
COL1A1-206ENST00000485870 SIGLEC14Q08ET2 396 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 MYBPC2Q14324 1141 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 PABPC1LQ4VXU2 614 aaKnown RBP19.85■□□□□ 0.77
COL1A1-206ENST00000485870 WSCD1Q658N2 575 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 OR10T2Q8NGX3 314 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 CXorf38Q8TB03 319 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 BORCS6Q96GS4 357 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 KCNK12Q9HB15 430 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.85■□□□□ 0.77
COL1A1-206ENST00000485870 CGNQ9P2M7 1197 aaKnown RBP19.85■□□□□ 0.77
COL1A1-206ENST00000485870 EPS15L1Q9UBC2 864 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 RAPGEFL1Q9UHV5 662 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 SIX4Q9UIU6 781 aa19.85■□□□□ 0.77
COL1A1-206ENST00000485870 EXOC3O60645 756 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 VNN2O95498 520 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 RBP5P82980 135 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 CYP24A1Q07973 514 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 TWF1Q12792 350 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 DUOXA2Q1HG44 320 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 HFE2Q6ZVN8 426 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 WDR49Q8IV35 697 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 C12orf56Q8IXR9 622 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 LRRC52Q8N7C0 313 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 ITFG1Q8TB96 612 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 GOLGA5Q8TBA6 731 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 RSAD2Q8WXG1 361 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 CCDC127Q96BQ5 260 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 FNBP1Q96RU3 617 aa19.84■□□□□ 0.77
COL1A1-206ENST00000485870 R3HCC1Q9Y3T6 440 aaKnown RBP19.84■□□□□ 0.77
COL1A1-206ENST00000485870 RHOBTB3O94955 611 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 RHOP08100 348 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 LAMP2P13473 410 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 CDR1P51861 262 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 GPR17Q13304 367 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 PSMD6Q15008 389 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 UBALD2Q8IYN6 164 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 FMR1NBQ8N0W7 255 aaPredicted RBP19.83■□□□□ 0.77
COL1A1-206ENST00000485870 THEM5Q8N1Q8 247 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 ST13P5Q8NFI4 369 aaPredicted RBP19.83■□□□□ 0.77
COL1A1-206ENST00000485870 ING5Q8WYH8 240 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 CGRRF1Q99675 332 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 RTP3Q9BQQ7 232 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 CORO1BQ9BR76 489 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 CRISPLD1Q9H336 500 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 KCTD10Q9H3F6 313 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 IGSF9Q9P2J2 1179 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 CDH7Q9ULB5 785 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 MAFFQ9ULX9 164 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 YIPF1Q9Y548 306 aa19.83■□□□□ 0.77
COL1A1-206ENST00000485870 ZDBF2Q9HCK1 2354 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 MTMR11A4FU01 709 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 PTPN2P17706 415 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 TNNI1P19237 187 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 DUSP4Q13115 394 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 SLC39A12Q504Y0 691 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 ELMOD1Q8N336 334 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 PDCL2Q8N4E4 241 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 ATAD1Q8NBU5 361 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 FGF13Q92913 245 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 CCDC34Q96HJ3 373 aa19.82■□□□□ 0.76
COL1A1-206ENST00000485870 L1RE1Q9UN81 338 aa19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms