RNA–Protein interactions for RNA: ENST00000485796.5

HDAC7-223, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 724 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-223ENST00000485796 KCNMA1Q12791 1236 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 CETN1Q12798 172 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 PTPN14Q15678 1187 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 SOWAHAQ2M3V2 549 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 ZNF699Q32M78 642 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 WDR72Q3MJ13 1102 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 FILIP1LQ4L180 1135 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 GJB7Q6PEY0 223 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 SCARA5Q6ZMJ2 495 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 LIMS2Q7Z4I7 341 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 ADGRD2Q7Z7M1 963 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 PDCL2Q8N4E4 241 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 EHBP1Q8NDI1 1231 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 LNX1Q8TBB1 728 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-223ENST00000485796 RIN2Q8WYP3 895 aaPredicted RBP13.63□□□□□ -0.23
HDAC7-223ENST00000485796 KAT5Q92993 513 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 ZNF560Q96MR9 790 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 GUCD1Q96NT3 240 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 TCF25Q9BQ70 676 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 RTP3Q9BQQ7 232 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 MRPL45Q9BRJ2 306 aaKnown RBP13.63□□□□□ -0.23
HDAC7-223ENST00000485796 TTPALQ9BTX7 342 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 INTS2Q9H0H0 1204 aaKnown RBP13.63□□□□□ -0.23
HDAC7-223ENST00000485796 SMYD3Q9H7B4 428 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 LZTS1Q9Y250 596 aa13.63□□□□□ -0.23
HDAC7-223ENST00000485796 SPTBN5Q9NRC6 3674 aaKnown RBP13.62□□□□□ -0.23
HDAC7-223ENST00000485796 TMEM265A0A087WTH1 108 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 STAU1O95793 577 aaKnown RBP13.62□□□□□ -0.23
HDAC7-223ENST00000485796 CTSAP10619 480 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 ATICP31939 592 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 PNPLA4P41247 253 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 ASPAP45381 313 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 DSG1Q02413 1049 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 MYO1EQ12965 1108 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 MRPL58Q14197 206 aaKnown RBP13.62□□□□□ -0.23
HDAC7-223ENST00000485796 CCDC142Q17RM4 750 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 SGSM1Q2NKQ1 1148 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 USP41Q3LFD5 358 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 SV2CQ496J9 727 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 VARS2Q5ST30 1063 aaKnown RBP13.62□□□□□ -0.23
HDAC7-223ENST00000485796 FKBP15Q5T1M5 1219 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-223ENST00000485796 TMC7Q7Z402 723 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 ARHGEF19Q8IW93 802 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 KBTBD7Q8WVZ9 684 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 MYLIPQ8WY64 445 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 TMEM209Q96SK2 561 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 CDX2Q99626 313 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-223ENST00000485796 ARID3AQ99856 593 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 LPIN3Q9BQK8 851 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 VRTNQ9H8Y1 702 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 SIX2Q9NPC8 291 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 TLR9Q9NR96 1032 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 GDAP2Q9NXN4 497 aa13.62□□□□□ -0.23
HDAC7-223ENST00000485796 PUF60Q9UHX1 559 aaKnown RBP13.62□□□□□ -0.23
HDAC7-223ENST00000485796 AJAP1Q9UKB5 411 aaPredicted RBP13.62□□□□□ -0.23
HDAC7-223ENST00000485796 COL4A4P53420 1690 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-223ENST00000485796 C2orf71A6NGG8 1288 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 P4HA2O15460 535 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 TRAPPC3O43617 180 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 TBC1D4O60343 1298 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 WEE2P0C1S8 567 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 LMO2P25791 158 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 PON1P27169 355 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 GTF2F1P35269 517 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC7-223ENST00000485796 GLUD2P49448 558 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 UBASH3AP57075 661 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 NOP14P78316 857 aaKnown RBP13.61□□□□□ -0.23
HDAC7-223ENST00000485796 UBXN1Q04323 297 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 UBE3AQ05086 875 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 UVSSAQ2YD98 709 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 ZNF667Q5HYK9 610 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 PHLDB3Q6NSJ2 640 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 GBP6Q6ZN66 633 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 GLYCTKQ8IVS8 523 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 DEFB123Q8N688 67 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 MICAL1Q8TDZ2 1067 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 MMS19Q96T76 1030 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 ENTPD7Q9NQZ7 604 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 IFNKQ9P0W0 207 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 GCNT4Q9P109 453 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 MTCH2Q9Y6C9 303 aa13.61□□□□□ -0.23
HDAC7-223ENST00000485796 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-223ENST00000485796 LGALS16A8MUM7 142 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 SYN3O14994 580 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 PER2O15055 1255 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 CYP11A1P05108 521 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 CNPP09543 421 aaKnown RBP13.6□□□□□ -0.23
HDAC7-223ENST00000485796 OR4Q2P0C623 313 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 ODC1P11926 461 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 TYMPP19971 482 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 IGFBP4P22692 258 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 ACAT1P24752 427 aaKnown RBP13.6□□□□□ -0.23
HDAC7-223ENST00000485796 CA8P35219 290 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 RBM10P98175 930 aaKnown RBP13.6□□□□□ -0.23
HDAC7-223ENST00000485796 ELAVL2Q12926 359 aaKnown RBP13.6□□□□□ -0.23
HDAC7-223ENST00000485796 ORC1Q13415 861 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 WDR44Q5JSH3 913 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 RRAGAQ7L523 313 aa13.6□□□□□ -0.23
HDAC7-223ENST00000485796 RBM23Q86U06 439 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms