RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 ENOSF1Q7L5Y1 443 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 KBTBD7Q8WVZ9 684 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 SHC3Q92529 594 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 IQCDQ96DY2 449 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 FAM81BQ96LP2 452 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 ARID3AQ99856 593 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 NUP58Q9BVL2 599 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 PLVAPQ9BX97 442 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 CHST7Q9NS84 486 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 CEP72Q9P209 647 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 L1RE1Q9UN81 338 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 PRG3Q9Y2Y8 225 aaPredicted RBP16.98■□□□□ 0.31
APOE-205ENST00000485628 NME7Q9Y5B8 376 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 FHOD1Q9Y613 1164 aa16.98■□□□□ 0.31
APOE-205ENST00000485628 TBC1D4O60343 1298 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 GYPCP04921 128 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 TBXAS1P24557 533 aaPredicted RBP16.97■□□□□ 0.31
APOE-205ENST00000485628 LRIT3Q3SXY7 679 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 FUT10Q6P4F1 479 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 DDX53Q86TM3 631 aaKnown RBP16.97■□□□□ 0.31
APOE-205ENST00000485628 GPR65Q8IYL9 337 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 WHAMMQ8TF30 809 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 PDLIM2Q96JY6 352 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 STK33Q9BYT3 514 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 IMPG2Q9BZV3 1241 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 UBE2TQ9NPD8 197 aaPredicted RBP16.97■□□□□ 0.31
APOE-205ENST00000485628 FAM207AQ9NSI2 230 aaPredicted RBP16.97■□□□□ 0.31
APOE-205ENST00000485628 SPG21Q9NZD8 308 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 DNAJC12Q9UKB3 198 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 MYO6Q9UM54 1294 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 CAPN11Q9UMQ6 739 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 PCDHB8Q9UN66 801 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 RWDD3Q9Y3V2 267 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 SNX9Q9Y5X1 595 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 PLXNA4Q9HCM2 1894 aa16.97■□□□□ 0.31
APOE-205ENST00000485628 TULP1O00294 542 aaPredicted RBP16.96■□□□□ 0.31
APOE-205ENST00000485628 CYB561D2O14569 222 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 SYN3O14994 580 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 TADA2AO75478 443 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 OAZ2O95190 189 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 RB1P06400 928 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 CA3P07451 260 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 WARSP23381 471 aaKnown RBP16.96■□□□□ 0.31
APOE-205ENST00000485628 PPM1AP35813 382 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 LRMPQ12912 555 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 ELAVL2Q12926 359 aaKnown RBP16.96■□□□□ 0.31
APOE-205ENST00000485628 RAB30Q15771 203 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 RRAGAQ7L523 313 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 TAS1R1Q7RTX1 841 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 SPRED2Q7Z698 418 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 PDCL2Q8N4E4 241 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 CCDC150Q8NCX0 1101 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 NEK11Q8NG66 645 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 HASPINQ8TF76 798 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 RTP3Q9BQQ7 232 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 SMYD3Q9H7B4 428 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.96■□□□□ 0.31
APOE-205ENST00000485628 AAASQ9NRG9 546 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 NXF1Q9UBU9 619 aaKnown RBP16.96■□□□□ 0.31
APOE-205ENST00000485628 LZTS1Q9Y250 596 aa16.96■□□□□ 0.31
APOE-205ENST00000485628 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.96■□□□□ 0.31
APOE-205ENST00000485628 I3L4J1 428 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 FOXN3O00409 490 aaPredicted RBP16.95■□□□□ 0.3
APOE-205ENST00000485628 TRAPPC3O43617 180 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 LILRB3O75022 631 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 CILPO75339 1184 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 WEE2P0C1S8 567 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 P4HA1P13674 534 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 FXR1P51114 621 aaKnown RBP eCLIP16.95■□□□□ 0.3
APOE-205ENST00000485628 ZNF132P52740 706 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 MFAP3P55082 362 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 CDH8P55286 799 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 POLR2FP61218 127 aaKnown RBP16.95■□□□□ 0.3
APOE-205ENST00000485628 WSCD1Q658N2 575 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 OSTM1Q86WC4 334 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 FAM71AQ8IYT1 594 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 TMEM86AQ8N2M4 240 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 PPM1KQ8N3J5 372 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 KLHL23Q8NBE8 558 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 SAMD11Q96NU1 681 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 MRPL45Q9BRJ2 306 aaKnown RBP16.95■□□□□ 0.3
APOE-205ENST00000485628 C17orf80Q9BSJ5 609 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 R3HCC1Q9Y3T6 440 aaKnown RBP16.95■□□□□ 0.3
APOE-205ENST00000485628 PCDHB12Q9Y5F1 795 aa16.95■□□□□ 0.3
APOE-205ENST00000485628 SF3B1O75533 1304 aaKnown RBP eCLIP16.95■□□□□ 0.35e-10■■■■■ 120.6
APOE-205ENST00000485628 HUS1O60921 280 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 FGF18O76093 207 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 SOD2P04179 222 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 HNRNPH3P31942 346 aaKnown RBP16.94■□□□□ 0.3
APOE-205ENST00000485628 TNNC1P63316 161 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 TRIM14Q14142 442 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 DRAP1Q14919 205 aaPredicted RBP16.94■□□□□ 0.3
APOE-205ENST00000485628 KIAA0319Q5VV43 1072 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.94■□□□□ 0.3
APOE-205ENST00000485628 APPL2Q8NEU8 664 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 SPPL3Q8TCT6 385 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 TGS1Q96RS0 853 aaKnown RBP16.94■□□□□ 0.3
APOE-205ENST00000485628 HERC2P3Q9BVR0 1158 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 CISHQ9NSE2 258 aa16.94■□□□□ 0.3
APOE-205ENST00000485628 AIPL1Q9NZN9 384 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms