RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	WDR27	A2RRH5	827 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	CHURC1-FNTB	B4DL54	471 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	HR	O43593	1189 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	SEC24A	O95486	1093 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	CEBPB	P17676	345 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	RPL9	P32969	192 aa	Known RBP	11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	MCM4	P33991	863 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	TNFSF9	P41273	254 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	FNTB	P49356	437 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	SATB1	Q01826	763 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	MCL1	Q07820	350 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	MCM6	Q14566	821 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	PPP2R5D	Q14738	602 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	KARS	Q15046	597 aa	Known RBP	11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	SF3A1	Q15459	793 aa	Known RBP	11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	CTXN3	Q4LDR2	81 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	IL31	Q6EBC2	164 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	HAUS6	Q7Z4H7	955 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZNF687	Q8N1G0	1237 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	MYCT1	Q8N699	235 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	RASSF8	Q8NHQ8	419 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZNF461	Q8TAF7	563 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	CALML4	Q96GE6	196 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	TBC1D32	Q96NH3	1257 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	REEP2	Q9BRK0	252 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	BRD9	Q9H8M2	597 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	LMAN1L	Q9HAT1	526 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	CYP4F11	Q9HBI6	524 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	LARS	Q9P2J5	1176 aa	Known RBP	11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	FBXL5	Q9UKA1	691 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	KCNH3	Q9ULD8	1083 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	TIMM13	Q9Y5L4	95 aa	Predicted RBP	11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZNF638	Q14966	1978 aa	Known RBP	11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	CIT	O14578	2027 aa		11.52	□□□□□ -0.57
HMGN1-215	ENST00000485550	IGF2R	P11717	2491 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	VPS37C	A5D8V6	355 aa	Predicted RBP	11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550		H7C4K7	107 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550		K7ENM7	598 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	MAN2B1	O00754	1011 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	NRG2	O14511	850 aa	Predicted RBP	11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	PRRG1	O14668	218 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	SYN3	O14994	580 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	ABLIM3	O94929	683 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	FAM13A	O94988	1023 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	LRG1	P02750	347 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	KRT18	P05783	430 aa	Known RBP	11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	RHO	P08100	348 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	MARCKS	P29966	332 aa	Predicted RBP	11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	MCM2	P49736	904 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	LIG4	P49917	911 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	CCR3	P51677	355 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	GUCY2F	P51841	1108 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	NCKAP1L	P55160	1127 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	MRPL58	Q14197	206 aa	Known RBP	11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	AASDH	Q4L235	1098 aa	Predicted RBP	11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	SLC8B1	Q6J4K2	584 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZPBP2	Q6X784	338 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	KCTD17	Q8N5Z5	321 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	FAM3C	Q92520	227 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	DNASE1L2	Q92874	299 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	SUSD3	Q96L08	255 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	AK8	Q96MA6	479 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	CORO1B	Q9BR76	489 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	BLOC1S4	Q9NUP1	217 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	KCND2	Q9NZV8	630 aa		11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	DAXX	Q9UER7	740 aa	Predicted RBP	11.51	□□□□□ -0.57
HMGN1-215	ENST00000485550	LACTBL1	A8MY62	500 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	TRAK2	O60296	914 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	CLTA	P09496	248 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	ATF2	P15336	505 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	PTPN2	P17706	415 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	PLCG1	P19174	1290 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	NMT1	P30419	496 aa	Known RBP	11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	CXCL12	P48061	93 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	GAS6	Q14393	721 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	CCDC6	Q16204	474 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	HEATR6	Q6AI08	1181 aa	Known RBP	11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	DDX1	Q92499	740 aa	Known RBP	11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	RAD54L	Q92698	747 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	DDX12P	Q92771	950 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	ELSPBP1	Q96BH3	223 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	TCEAL4	Q96EI5	215 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	ODF2L	Q9ULJ1	636 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	TBX20	Q9UMR3	447 aa		11.5	□□□□□ -0.57
HMGN1-215	ENST00000485550	TTC26	A0AVF1	554 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550		H0YCG3	227 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	TULP1	O00294	542 aa	Predicted RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	HNRNPDL	O14979	420 aa	Known RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	POU2F2	P09086	479 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	OR4Q2	P0C623	313 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	CPB1	P15086	417 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	FCAR	P24071	287 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	HOXC13	P31276	330 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	LONP1	P36776	959 aa	Known RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	CDR1	P51861	262 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	PPP2R3A	Q06190	1150 aa		11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	SF3A2	Q15428	464 aa	Known RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	ENOX2	Q16206	610 aa	Known RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	11.49	□□□□□ -0.57
HMGN1-215	ENST00000485550	ZNF280D	Q6N043	979 aa		11.49	□□□□□ -0.57

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