RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 LIMS2Q7Z4I7 341 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 PALB2Q86YC2 1186 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 ZNF516Q92618 1163 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 POP1Q99575 1024 aaKnown RBP19.16■□□□□ 0.66
SREBF1-213ENST00000485080 MAN1C1Q9NR34 630 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 ZDHHC7Q9NXF8 308 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 FBXL5Q9UKA1 691 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 CDY1Q9Y6F8 540 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 PLXNA3P51805 1871 aa19.16■□□□□ 0.66
SREBF1-213ENST00000485080 OR6C75A6NL08 312 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 LRRIQ3A6PVS8 624 aaPredicted RBP19.15■□□□□ 0.66
SREBF1-213ENST00000485080 CYB561D2O14569 222 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 CETN3O15182 167 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 POU2F2P09086 479 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 MYO1EQ12965 1108 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 CLUL1Q15846 466 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 UVSSAQ2YD98 709 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 CTXN3Q4LDR2 81 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 CEP135Q66GS9 1140 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 TPGS2Q68CL5 300 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 LMBRD2Q68DH5 695 aaPredicted RBP19.15■□□□□ 0.66
SREBF1-213ENST00000485080 CES5AQ6NT32 575 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 KREMEN2Q8NCW0 462 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 ZNF461Q8TAF7 563 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 NECTIN4Q96NY8 510 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 TSG101Q99816 390 aa19.15■□□□□ 0.66
SREBF1-213ENST00000485080 USP15Q9Y4E8 981 aaPredicted RBP19.15■□□□□ 0.66
SREBF1-213ENST00000485080 C4BPAP04003 597 aaKnown RBP19.14■□□□□ 0.65
SREBF1-213ENST00000485080 FAM163BP0C2L3 166 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 CD44P16070 742 aaKnown RBP19.14■□□□□ 0.65
SREBF1-213ENST00000485080 HOXA9P31269 272 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 ROR1Q01973 937 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 CAMK4Q16566 473 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 C1orf220Q5T0J3 134 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 ANKRD40Q6AI12 368 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 OVOS1Q6IE37 1185 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 DPH6Q7L8W6 267 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 GPR149Q86SP6 731 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 FAM186BQ8IYM0 893 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 HPDLQ96IR7 371 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 FAM84AQ96KN4 292 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 VRTNQ9H8Y1 702 aa19.14■□□□□ 0.65
SREBF1-213ENST00000485080 R3HCC1Q9Y3T6 440 aaKnown RBP19.14■□□□□ 0.65
SREBF1-213ENST00000485080 TCF20Q9UGU0 1960 aaKnown RBP19.13■□□□□ 0.65
SREBF1-213ENST00000485080 SLC16A3O15427 465 aaKnown RBP19.13■□□□□ 0.65
SREBF1-213ENST00000485080 ZMYND10O75800 440 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 KRT19P08727 400 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 HNRNPA1P09651 372 aaKnown RBP eCLIP19.13■□□□□ 0.65
SREBF1-213ENST00000485080 IL9P15248 144 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 ATF2P15336 505 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 ATICP31939 592 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 MTHFRP42898 656 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 VAMP7P51809 220 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 PMS1P54277 932 aaKnown RBP19.13■□□□□ 0.65
SREBF1-213ENST00000485080 ZACNQ401N2 412 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 SCARA3Q6AZY7 606 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 METTL23Q86XA0 190 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 TMEM86AQ8N2M4 240 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 TOP6BLQ8N6T0 577 aa19.13■□□□□ 0.65
SREBF1-213ENST00000485080 AFF4Q9UHB7 1163 aaKnown RBP19.13■□□□□ 0.65
SREBF1-213ENST00000485080 TIMM13Q9Y5L4 95 aaPredicted RBP19.13■□□□□ 0.65
SREBF1-213ENST00000485080 BICDL2A1A5D9 508 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 WDR27A2RRH5 827 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 HUS1O60921 280 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 CST3P01034 146 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-213ENST00000485080 GTF2H1P32780 548 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 BFSP1Q12934 665 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 CBX2Q14781 532 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-213ENST00000485080 ATAT1Q5SQI0 421 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 RARS2Q5T160 578 aaKnown RBP19.12■□□□□ 0.65
SREBF1-213ENST00000485080 TDRD10Q5VZ19 366 aaKnown RBP19.12■□□□□ 0.65
SREBF1-213ENST00000485080 WSCD1Q658N2 575 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 ISM2Q6H9L7 571 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 TTI2Q6NXR4 508 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 GLYCTKQ8IVS8 523 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 TCEAL8Q8IYN2 117 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 C12orf76Q8N812 135 aaPredicted RBP19.12■□□□□ 0.65
SREBF1-213ENST00000485080 GPT2Q8TD30 523 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 ADAMTS19Q8TE59 1207 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 RIPOR3Q96MK2 946 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 CEP63Q96MT8 703 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 XYLT2Q9H1B5 865 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 NUP62CLQ9H1M0 184 aa19.12■□□□□ 0.65
SREBF1-213ENST00000485080 TSC2P49815 1807 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 BIN1O00499 593 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 SPATA31D3P0C874 917 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 EPB41P11171 864 aaKnown RBP19.11■□□□□ 0.65
SREBF1-213ENST00000485080 KRT13P13646 458 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 DLG4P78352 724 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 GPR17Q13304 367 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 LIN9Q5TKA1 542 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 SPATA31D4Q6ZUB0 917 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 CCDC149Q6ZUS6 474 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 SV2AQ7L0J3 742 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 ADHFE1Q8IWW8 467 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 PDCL2Q8N4E4 241 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 MLKLQ8NB16 471 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 ZNF707Q96C28 371 aaPredicted RBP19.11■□□□□ 0.65
SREBF1-213ENST00000485080 RTP3Q9BQQ7 232 aa19.11■□□□□ 0.65
SREBF1-213ENST00000485080 PHF7Q9BWX1 381 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms