RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 MTMR3Q13615 1198 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 UVSSAQ2YD98 709 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 DENND4CQ5VZ89 1909 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 NT5DC4Q86YG4 428 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 C1orf127Q8N9H9 656 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 KIAA0895Q8NCT3 520 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 ITFG1Q8TB96 612 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 KCNK12Q9HB15 430 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 AFF4Q9UHB7 1163 aaKnown RBP13.26□□□□□ -0.29
MSH5-216ENST00000484309 USP25Q9UHP3 1055 aa13.26□□□□□ -0.29
MSH5-216ENST00000484309 FAM237AA0A1B0GTK4 181 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 A0A1W2PQ27 194 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 A0A1W2PQ64 194 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 A0A1W2PQD8 194 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 ZNF233A6NK53 670 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 KIAA0391O15091 583 aaKnown RBP13.25□□□□□ -0.29
MSH5-216ENST00000484309 PDGFBP01127 241 aaPredicted RBP13.25□□□□□ -0.29
MSH5-216ENST00000484309 NUCB2P80303 420 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 BMT2Q1RMZ1 405 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 SV2CQ496J9 727 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 PABPC1LQ4VXU2 614 aaKnown RBP13.25□□□□□ -0.29
MSH5-216ENST00000484309 WSCD1Q658N2 575 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 TPGS2Q68CL5 300 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 KRBA2Q6ZNG9 492 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 TCEAL8Q8IYN2 117 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 CSGALNACT2Q8N6G5 542 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 TTC9BQ8N6N2 239 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 OR5B17Q8NGF7 314 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 OR10T2Q8NGX3 314 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 CACTINQ8WUQ7 758 aaKnown RBP13.25□□□□□ -0.29
MSH5-216ENST00000484309 ZNF560Q96MR9 790 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 CORO1BQ9BR76 489 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 CRISPLD1Q9H336 500 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 PTPRDP23468 1912 aa13.25□□□□□ -0.29
MSH5-216ENST00000484309 ARHGEF37A1IGU5 675 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 OR6C75A6NL08 312 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 KPNA7A9QM74 516 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 NARSO43776 548 aaKnown RBP13.24□□□□□ -0.29
MSH5-216ENST00000484309 ZNF202O95125 648 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 RPN1P04843 607 aaKnown RBP13.24□□□□□ -0.29
MSH5-216ENST00000484309 DLATP10515 647 aaKnown RBP13.24□□□□□ -0.29
MSH5-216ENST00000484309 LAMP2P13473 410 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 TWF1Q12792 350 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 SNRNP35Q16560 246 aaKnown RBP13.24□□□□□ -0.29
MSH5-216ENST00000484309 KNOP1Q1ED39 458 aaKnown RBP13.24□□□□□ -0.29
MSH5-216ENST00000484309 SLC5A9Q2M3M2 681 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 HS2ST1Q7LGA3 356 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 METTL23Q86XA0 190 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 XXYLT1Q8NBI6 393 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 CXorf38Q8TB03 319 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 PBXIP1Q96AQ6 731 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 CCDC127Q96BQ5 260 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 ASIC4Q96FT7 647 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 BORCS6Q96GS4 357 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 ANKRD36BP1Q96IX9 119 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 RTP3Q9BQQ7 232 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 INTS13Q9NVM9 706 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.24□□□□□ -0.29
MSH5-216ENST00000484309 EPS15L1Q9UBC2 864 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 SIX4Q9UIU6 781 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 SLC27A5Q9Y2P5 690 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 YIPF1Q9Y548 306 aa13.24□□□□□ -0.29
MSH5-216ENST00000484309 MTMR11A4FU01 709 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 NRG2O14511 850 aaPredicted RBP13.23□□□□□ -0.29
MSH5-216ENST00000484309 EXOC3O60645 756 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 SOAT2O75908 522 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 TNNC2P02585 160 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 CYP11A1P05108 521 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 RHOP08100 348 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 POU2F2P09086 479 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 CEBPBP17676 345 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 PTPN2P17706 415 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 CYP24A1Q07973 514 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 DPYDQ12882 1025 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 DUSP4Q13115 394 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 GPR17Q13304 367 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 TDGQ13569 410 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 SLC39A12Q504Y0 691 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 UBALD2Q8IYN6 164 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 HS6ST3Q8IZP7 471 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 ATAD1Q8NBU5 361 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 FGF13Q92913 245 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 TCEAL4Q96EI5 215 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 CEP72Q9P209 647 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 ITGA11Q9UKX5 1188 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 DSEQ9UL01 958 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 CDH7Q9ULB5 785 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 L1RE1Q9UN81 338 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 MAPK8IP1Q9UQF2 711 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 MRPS23Q9Y3D9 190 aaKnown RBP13.23□□□□□ -0.29
MSH5-216ENST00000484309 HCN4Q9Y3Q4 1203 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 NUMBLQ9Y6R0 609 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 COL4A3Q01955 1670 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 MUC6Q6W4X9 2439 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 MYH10P35580 1976 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 GREB1Q4ZG55 1949 aa13.23□□□□□ -0.29
MSH5-216ENST00000484309 NUP210Q8TEM1 1887 aaPredicted RBP13.23□□□□□ -0.29
MSH5-216ENST00000484309 MIA3Q5JRA6 1907 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 TICRRQ7Z2Z1 1910 aa13.22□□□□□ -0.29
MSH5-216ENST00000484309 GOLGA6L4A6NEF3 574 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms