RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SYKP43405 635 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 KMT5BQ4FZB7 885 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 PABPC1LQ4VXU2 614 aaKnown RBP13.93□□□□□ -0.18
HDAC1-209ENST00000484305 LMBRD2Q68DH5 695 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-209ENST00000484305 C1orf127Q8N9H9 656 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 ST13P5Q8NFI4 369 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-209ENST00000484305 CXorf38Q8TB03 319 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 ITFG1Q8TB96 612 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 CACTINQ8WUQ7 758 aaKnown RBP13.93□□□□□ -0.18
HDAC1-209ENST00000484305 PGLYRP2Q96PD5 576 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 TMEM209Q96SK2 561 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 OXCT2Q9BYC2 517 aaPredicted RBP13.93□□□□□ -0.18
HDAC1-209ENST00000484305 GOLPH3LQ9H4A5 285 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 IGSF9Q9P2J2 1179 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 AGAP1Q9UPQ3 857 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 INSL5Q9Y5Q6 135 aa13.93□□□□□ -0.18
HDAC1-209ENST00000484305 PTPRJQ12913 1337 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 ZDBF2Q9HCK1 2354 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 A0A1W2PQ27 194 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 A0A1W2PQ64 194 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 A0A1W2PQD8 194 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 ZNF233A6NK53 670 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 OR6C75A6NL08 312 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 KPNA7A9QM74 516 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 PDGFBP01127 241 aaPredicted RBP13.92□□□□□ -0.18
HDAC1-209ENST00000484305 CYP11A1P05108 521 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 PTPN2P17706 415 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 CYP2J2P51589 502 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 STK4Q13043 487 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 GPR17Q13304 367 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 TDGQ13569 410 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 BMT2Q1RMZ1 405 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 SLC5A9Q2M3M2 681 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 SV2CQ496J9 727 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 WSCD1Q658N2 575 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 CSGALNACT2Q8N6G5 542 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 FSIP1Q8NA03 581 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 RDH13Q8NBN7 331 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 OR10T2Q8NGX3 314 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 FGF13Q92913 245 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 MFSD14AQ96MC6 490 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 RTP3Q9BQQ7 232 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 MTMR12Q9C0I1 747 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 EXOC1Q9NV70 894 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 SIX4Q9UIU6 781 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 CDH7Q9ULB5 785 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 MAFFQ9ULX9 164 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 HCN4Q9Y3Q4 1203 aa13.92□□□□□ -0.18
HDAC1-209ENST00000484305 KMT2EQ8IZD2 1858 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 ANHXE9PGG2 379 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 NARSO43776 548 aaKnown RBP13.91□□□□□ -0.18
HDAC1-209ENST00000484305 RHOP08100 348 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 PRR29P0C7W0 189 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 CDR1P51861 262 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 SNRPFP62306 86 aaKnown RBP13.91□□□□□ -0.18
HDAC1-209ENST00000484305 TWF1Q12792 350 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 MYBPC2Q14324 1141 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 SNRNP35Q16560 246 aaKnown RBP13.91□□□□□ -0.18
HDAC1-209ENST00000484305 KNOP1Q1ED39 458 aaKnown RBP13.91□□□□□ -0.18
HDAC1-209ENST00000484305 HS2ST1Q7LGA3 356 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 SLC44A3Q8N4M1 653 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 FBXL6Q8N531 539 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 KIAA0895Q8NCT3 520 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 OR5B17Q8NGF7 314 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 ING5Q8WYH8 240 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 ZNF560Q96MR9 790 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 CORO1BQ9BR76 489 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 CRISPLD1Q9H336 500 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 KIAA1586Q9HCI6 787 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 INTS13Q9NVM9 706 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 CEP72Q9P209 647 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 ITGA11Q9UKX5 1188 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 DSEQ9UL01 958 aa13.91□□□□□ -0.18
HDAC1-209ENST00000484305 ZFP37Q9Y6Q3 630 aaPredicted RBP13.91□□□□□ -0.18
HDAC1-209ENST00000484305 MTMR11A4FU01 709 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 ZNF202O95125 648 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 RPN1P04843 607 aaKnown RBP13.9□□□□□ -0.18
HDAC1-209ENST00000484305 MYL1P05976 194 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 KRT19P08727 400 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 TMEM191BP0C7N4 346 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 PNPLA4P41247 253 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 NUCB2P80303 420 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 DUSP4Q13115 394 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 PSMD2Q13200 908 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 HTR4Q13639 388 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 SURF1Q15526 300 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 CENPPQ6IPU0 288 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 POTEHQ6S545 545 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 PARM1Q6UWI2 310 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 KRBA2Q6ZNG9 492 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 METTL23Q86XA0 190 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 NPAS3Q8IXF0 933 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 TTC9BQ8N6N2 239 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 LRRC52Q8N7C0 313 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 XXYLT1Q8NBI6 393 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 ATAD1Q8NBU5 361 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 FGF14Q92915 247 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 TCEAL4Q96EI5 215 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 ANKRD36BP1Q96IX9 119 aa13.9□□□□□ -0.18
HDAC1-209ENST00000484305 RPP25Q9BUL9 199 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms