RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 EPC2Q52LR7 807 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 NT5DC1Q5TFE4 455 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 ATF7IP2Q5U623 682 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 HAUS6Q7Z4H7 955 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 ZDHHC13Q8IUH4 622 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 FAM178BQ8IXR5 827 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 CCDC65Q8IXS2 484 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 TMEM161BQ8NDZ6 487 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 URGCPQ8TCY9 931 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 MYLIPQ8WY64 445 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 KCNN1Q92952 543 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 PBXIP1Q96AQ6 731 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 GUCD1Q96NT3 240 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 C17orf80Q9BSJ5 609 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 KIFC3Q9BVG8 833 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 C7orf69Q9H7B7 122 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 RSAD1Q9HA92 442 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 TYW1Q9NV66 732 aaKnown RBP9.76□□□□□ -0.85
COL8A1-207ENST00000483969 KBTBD4Q9NVX7 518 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 LMCD1Q9NZU5 365 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 TMEM63CQ9P1W3 806 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 MTUS1Q9ULD2 1270 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 TNFSF13BQ9Y275 285 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 STXBP5LQ9Y2K9 1186 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 GIT1Q9Y2X7 761 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 IPPQ9Y573 584 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 PCDHB12Q9Y5F1 795 aa9.76□□□□□ -0.85
COL8A1-207ENST00000483969 C5orf67F2Z3F1 127 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 H3BNC9 293 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 ALDH2P05091 517 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 FOSL2P15408 326 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 ATF7P17544 494 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 LAG3P18627 525 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 POU3F3P20264 500 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 CTNNB1P35222 781 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 GATMP50440 423 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 RNASELQ05823 741 aaKnown RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 GPM6BQ13491 265 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 PTPROQ16827 1216 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 DCAF4L1Q3SXM0 396 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 LONRF3Q496Y0 759 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 HERC4Q5GLZ8 1057 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 NOMO2Q5JPE7 1267 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 CLLU1OSQ5K130 101 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 RNF43Q68DV7 783 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 ANKRD34AQ69YU3 496 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 ADAMTSL4Q6UY14 1074 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 ZPBP2Q6X784 338 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 AGMOQ6ZNB7 445 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 CDR2LQ86X02 465 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 LRRC43Q8N309 656 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 SMG8Q8ND04 991 aaKnown RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 HELQQ8TDG4 1101 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 LPPQ93052 612 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 P2RX5Q93086 422 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 DNAJC19Q96DA6 116 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 CCDC34Q96HJ3 373 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 FAM193BQ96PV7 902 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 ACO2Q99798 780 aaKnown RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 C7orf25Q9BPX7 421 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 C11orf84Q9BUA3 381 aaPredicted RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 TARS2Q9BW92 718 aaKnown RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 EIF2AQ9BY44 585 aaKnown RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 ST6GALNAC4Q9H4F1 302 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 PDZD7Q9H5P4 517 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 OSGEPQ9NPF4 335 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 RNF19AQ9NV58 838 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 PANK4Q9NVE7 773 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 PARP2Q9UGN5 583 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 PUF60Q9UHX1 559 aaKnown RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 TBX20Q9UMR3 447 aa9.75□□□□□ -0.85
COL8A1-207ENST00000483969 MRPL42Q9Y6G3 142 aaKnown RBP9.75□□□□□ -0.85
COL8A1-207ENST00000483969 FAM237AA0A1B0GTK4 181 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 A0A1B0GVL5 298 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 K7ENM7 598 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 RFXAPO00287 272 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 CLDN3O15551 220 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 ADAM11O75078 769 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 TOM1L1O75674 476 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 SLFN14P0C7P3 912 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 MCF2P10911 925 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 PFKFB1P16118 471 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 PCSK2P16519 638 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 MATR3P43243 847 aaKnown RBP eCLIP9.74□□□□□ -0.85
COL8A1-207ENST00000483969 SYKP43405 635 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 ALDH7A1P49419 539 aaKnown RBP9.74□□□□□ -0.85
COL8A1-207ENST00000483969 GTF2BQ00403 316 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 KRT17Q04695 432 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 ALCAMQ13740 583 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 CNNM4Q6P4Q7 775 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 STXBP4Q6ZWJ1 553 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 ZNF720Q7Z2F6 126 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 UBASH3BQ8TF42 649 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 STAMQ92783 540 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 HVCN1Q96D96 273 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 BICD1Q96G01 975 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 CHAMP1Q96JM3 812 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 ZNF558Q96NG5 402 aa9.74□□□□□ -0.85
COL8A1-207ENST00000483969 POP1Q99575 1024 aaKnown RBP9.74□□□□□ -0.85
COL8A1-207ENST00000483969 APOL6Q9BWW8 343 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms