RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 TPGS2Q68CL5 300 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 LMBRD2Q68DH5 695 aaPredicted RBP16.8■□□□□ 0.28
RPP40-206ENST00000483546 ANKRD40Q6AI12 368 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 ISM2Q6H9L7 571 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 OVOS1Q6IE37 1185 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 PTCRAQ6ISU1 281 aaPredicted RBP16.8■□□□□ 0.28
RPP40-206ENST00000483546 CES5AQ6NT32 575 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 DPH6Q7L8W6 267 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 TMEM86AQ8N2M4 240 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 TMEM130Q8N3G9 435 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 TOP6BLQ8N6T0 577 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 CMASQ8NFW8 434 aaPredicted RBP16.8■□□□□ 0.28
RPP40-206ENST00000483546 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.8■□□□□ 0.28
RPP40-206ENST00000483546 HPDLQ96IR7 371 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 MAN1C1Q9NR34 630 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 FBXL5Q9UKA1 691 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 FBXW11Q9UKB1 542 aa16.8■□□□□ 0.28
RPP40-206ENST00000483546 SPDYE4A6NLX3 237 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 MBTPS2O43462 519 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 HUS1O60921 280 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 FAM163BP0C2L3 166 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 CD44P16070 742 aaKnown RBP16.79■□□□□ 0.28
RPP40-206ENST00000483546 GTF2H1P32780 548 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 RBM10P98175 930 aaKnown RBP16.79■□□□□ 0.28
RPP40-206ENST00000483546 TRPC3Q13507 836 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 UVSSAQ2YD98 709 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 LIN9Q5TKA1 542 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 SYCE2Q6PIF2 218 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 C15orf39Q6ZRI6 1047 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 PALB2Q86YC2 1186 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 THEM5Q8N1Q8 247 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 KREMEN2Q8NCW0 462 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 ZNF461Q8TAF7 563 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 GPT2Q8TD30 523 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 PLEKHO2Q8TD55 490 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 NELFBQ8WX92 580 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 ZNF516Q92618 1163 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 SYAP1Q96A49 352 aaPredicted RBP16.79■□□□□ 0.28
RPP40-206ENST00000483546 NECTIN4Q96NY8 510 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 POP1Q99575 1024 aaKnown RBP16.79■□□□□ 0.28
RPP40-206ENST00000483546 ADAM7Q9H2U9 754 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 VRTNQ9H8Y1 702 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 METTL14Q9HCE5 456 aaKnown RBP16.79■□□□□ 0.28
RPP40-206ENST00000483546 ZDHHC7Q9NXF8 308 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 DACH1Q9UI36 760 aa16.79■□□□□ 0.28
RPP40-206ENST00000483546 PHACTR2O75167 634 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 ABLIM3O94929 683 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 FGFR1OPO95684 399 aaKnown RBP16.78■□□□□ 0.28
RPP40-206ENST00000483546 C4BPAP04003 597 aaKnown RBP16.78■□□□□ 0.28
RPP40-206ENST00000483546 BMP1P13497 986 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 PTMSP20962 102 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 HOXA9P31269 272 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 PMS1P54277 932 aaKnown RBP16.78■□□□□ 0.28
RPP40-206ENST00000483546 ROR1Q01973 937 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 BIRC3Q13489 604 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 SMAD2Q15796 467 aaKnown RBP16.78■□□□□ 0.28
RPP40-206ENST00000483546 ZACNQ401N2 412 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 CT47A1Q5JQC4 288 aaPredicted RBP16.78■□□□□ 0.28
RPP40-206ENST00000483546 KLHL10Q6JEL2 608 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 TTI2Q6NXR4 508 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 RBM43Q6ZSC3 357 aaKnown RBP16.78■□□□□ 0.28
RPP40-206ENST00000483546 CCDC149Q6ZUS6 474 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 FILIP1Q7Z7B0 1213 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 GLYCTKQ8IVS8 523 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 TAF4BQ92750 862 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 S1PR5Q9H228 398 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 PRKAG3Q9UGI9 489 aa16.78■□□□□ 0.28
RPP40-206ENST00000483546 TRIM49BA6NDI0 452 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 ADAM12O43184 909 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 GNA14O95837 355 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 POU2F2P09086 479 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 HNRNPA1P09651 372 aaKnown RBP eCLIP16.77■□□□□ 0.28
RPP40-206ENST00000483546 ATF2P15336 505 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 MTHFRP42898 656 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 KCNQ1P51787 676 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 DLG4P78352 724 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 SMARCB1Q12824 385 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 TDRD10Q5VZ19 366 aaKnown RBP16.77■□□□□ 0.28
RPP40-206ENST00000483546 RSPO2Q6UXX9 243 aaPredicted RBP16.77■□□□□ 0.28
RPP40-206ENST00000483546 FRMD5Q7Z6J6 570 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 SUSD6Q92537 303 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 RIPOR3Q96MK2 946 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 ARMCX3Q9UH62 379 aaPredicted RBP16.77■□□□□ 0.28
RPP40-206ENST00000483546 AFF4Q9UHB7 1163 aaKnown RBP16.77■□□□□ 0.28
RPP40-206ENST00000483546 RWDD2AQ9UIY3 292 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 CTNND2Q9UQB3 1225 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 USP15Q9Y4E8 981 aaPredicted RBP16.77■□□□□ 0.28
RPP40-206ENST00000483546 TIMM13Q9Y5L4 95 aaPredicted RBP16.77■□□□□ 0.28
RPP40-206ENST00000483546 SNX9Q9Y5X1 595 aa16.77■□□□□ 0.28
RPP40-206ENST00000483546 WDR27A2RRH5 827 aa16.76■□□□□ 0.27
RPP40-206ENST00000483546 ZMYND10O75800 440 aa16.76■□□□□ 0.27
RPP40-206ENST00000483546 CST3P01034 146 aaPredicted RBP16.76■□□□□ 0.27
RPP40-206ENST00000483546 CPB1P15086 417 aa16.76■□□□□ 0.27
RPP40-206ENST00000483546 ELF1P32519 619 aa16.76■□□□□ 0.27
RPP40-206ENST00000483546 LHX1P48742 406 aa16.76■□□□□ 0.27
RPP40-206ENST00000483546 MYL7Q01449 175 aa16.76■□□□□ 0.27
RPP40-206ENST00000483546 GPR17Q13304 367 aa16.76■□□□□ 0.27
RPP40-206ENST00000483546 NCOA4Q13772 614 aa16.76■□□□□ 0.27
RPP40-206ENST00000483546 CLUL1Q15846 466 aa16.76■□□□□ 0.27
RPP40-206ENST00000483546 SGSM1Q2NKQ1 1148 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms