RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 CDK5RAP3Q96JB5 506 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 LRRC3BQ96PB8 259 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 REEP2Q9BRK0 252 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 NTPCRQ9BSD7 190 aaKnown RBP15.13■□□□□ 0.01
VARS-226ENST00000483275 LRRC3Q9BY71 257 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 IKZF4Q9H2S9 585 aa15.13■□□□□ 0.01
VARS-226ENST00000483275 KMT2BQ9UMN6 2715 aaPredicted RBP15.13■□□□□ 0.01
VARS-226ENST00000483275 MTMR11A4FU01 709 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 TISP43B9A030 160 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 MAN2B1O00754 1011 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 HNRNPDLO14979 420 aaKnown RBP15.12■□□□□ 0.01
VARS-226ENST00000483275 MICAL2O94851 1124 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 OAZ2O95190 189 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 CD2BP2O95400 341 aaKnown RBP15.12■□□□□ 0.01
VARS-226ENST00000483275 NFICP08651 508 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 LRPAP1P30533 357 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 NCKAP1LP55160 1127 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 HEATR6Q6AI08 1181 aaKnown RBP15.12■□□□□ 0.01
VARS-226ENST00000483275 OVOS1Q6IE37 1185 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 JADE1Q6IE81 842 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 SLC39A4Q6P5W5 647 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 TXNDC11Q6PKC3 985 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 PRR23BQ6ZRT6 265 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 USP37Q86T82 979 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 GPBP1Q86WP2 473 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 LPIN3Q9BQK8 851 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 TIPINQ9BVW5 301 aa15.12■□□□□ 0.01
VARS-226ENST00000483275 SMG9Q9H0W8 520 aaKnown RBP15.12■□□□□ 0.01
VARS-226ENST00000483275 DCDC2BA2VCK2 349 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 CHURC1-FNTBB4DL54 471 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 PRAMEF12O95522 483 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 CHRNB1P11230 501 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 TGM1P22735 817 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 FNTBP49356 437 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 AARSP49588 968 aaKnown RBP eCLIP15.11■□□□□ 0.01
VARS-226ENST00000483275 EPHB3P54753 998 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 CYP4F8P98187 520 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 GRIN1Q05586 938 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 SPEM2Q0P670 501 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 ZBTB6Q15916 424 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 GAREM2Q75VX8 874 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 MFSD6LQ8IWD5 586 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 OR10T2Q8NGX3 314 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 DEPDC1BQ8WUY9 529 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 MKNK1Q9BUB5 465 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 ZHX3Q9H4I2 956 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 TRPV4Q9HBA0 871 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 CDV3Q9UKY7 258 aaKnown RBP15.11■□□□□ 0.01
VARS-226ENST00000483275 TBX20Q9UMR3 447 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 UBQLN1Q9UMX0 589 aaKnown RBP15.11■□□□□ 0.01
VARS-226ENST00000483275 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.11■□□□□ 0.01
VARS-226ENST00000483275 SPAG17Q6Q759 2223 aa15.11■□□□□ 0.01
VARS-226ENST00000483275 NMT1P30419 496 aaKnown RBP15.1■□□□□ 0.01
VARS-226ENST00000483275 KPNA1P52294 538 aaPredicted RBP15.1■□□□□ 0.01
VARS-226ENST00000483275 ATXN1P54253 815 aaKnown RBP15.1■□□□□ 0.01
VARS-226ENST00000483275 TNK2Q07912 1038 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 MCM6Q14566 821 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 C8orf34Q49A92 452 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 SLC39A12Q504Y0 691 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 RILPL1Q5EBL4 403 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 CENPPQ6IPU0 288 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 ARID3BQ8IVW6 561 aaPredicted RBP15.1■□□□□ 0.01
VARS-226ENST00000483275 YAF2Q8IY57 180 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 STKLD1Q8NE28 680 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 CSGALNACT1Q8TDX6 532 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 SENP8Q96LD8 212 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 SEPT5Q99719 369 aaPredicted RBP15.1■□□□□ 0.01
VARS-226ENST00000483275 MSTO1Q9BUK6 570 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 RPF1Q9H9Y2 349 aaKnown RBP15.1■□□□□ 0.01
VARS-226ENST00000483275 PLEKHA5Q9HAU0 1116 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 GTSE1Q9NYZ3 720 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 GMEB2Q9UKD1 530 aa15.1■□□□□ 0.01
VARS-226ENST00000483275 EML5Q05BV3 1969 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 OR6C75A6NL08 312 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 TULP1O00294 542 aaPredicted RBP15.09■□□□□ 0.01
VARS-226ENST00000483275 OGTO15294 1046 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 FAM13AO94988 1023 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 PLCG1P19174 1290 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 GABRR2P28476 465 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 GJB2P29033 226 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 ALDH1A3P47895 512 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 ACOT2P49753 483 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 CCR3P51677 355 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 LILRA4P59901 499 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 GPR17Q13304 367 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 GPR158Q5T848 1215 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 C9orf57Q5W0N0 161 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 MYCT1Q8N699 235 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 LEMD2Q8NC56 503 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 SECISBP2LQ93073 1101 aaKnown RBP15.09■□□□□ 0.01
VARS-226ENST00000483275 FAM84AQ96KN4 292 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 CNTNAP3BQ96NU0 1288 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 CNTNAP3Q9BZ76 1288 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 ATXN3LQ9H3M9 355 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 BLOC1S4Q9NUP1 217 aa15.09■□□□□ 0.01
VARS-226ENST00000483275 LARSQ9P2J5 1176 aaKnown RBP15.09■□□□□ 0.01
VARS-226ENST00000483275 CNOT1A5YKK6 2376 aaKnown RBP15.09■□□□□ 0.01
VARS-226ENST00000483275 LAMA1P25391 3075 aa15.08■□□□□ 0.01
VARS-226ENST00000483275 A0A0B4J269 797 aa15.08■□□□□ 0
VARS-226ENST00000483275 ANKRD63C9JTQ0 380 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms