RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 PMM2O15305 246 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 DGKZQ13574 1117 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 ACAD10Q6JQN1 1059 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 LLGL2Q6P1M3 1020 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 SNF8Q96H20 258 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 FAM84AQ96KN4 292 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 KIFC3Q9BVG8 833 aa13.13□□□□□ -0.31
CCDC78-213ENST00000482878 R3HDM2Q9Y2K5 976 aaKnown RBP13.13□□□□□ -0.31
CCDC78-213ENST00000482878 MAPK13O15264 365 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 BRAFP15056 766 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 GM2AP17900 193 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 MAPK4P31152 587 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 ERFP50548 548 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 TNIP1Q15025 636 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 RCN1Q15293 331 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 C2CD6Q53TS8 623 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 SNX30Q5VWJ9 437 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 FOXB2Q5VYV0 432 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 KRT39Q6A163 491 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 LCA5Q86VQ0 697 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 ECHDC2Q86YB7 292 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 CKAP2Q8WWK9 683 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 SCG3Q8WXD2 468 aaKnown RBP13.12□□□□□ -0.31
CCDC78-213ENST00000482878 LRRC37BQ96QE4 947 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 FAM118BQ9BPY3 351 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 TBC1D10AQ9BXI6 508 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 THAP12O43422 761 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 YWHABP31946 246 aaKnown RBP13.12□□□□□ -0.31
CCDC78-213ENST00000482878 FKBP1AP62942 108 aaKnown RBP13.12□□□□□ -0.31
CCDC78-213ENST00000482878 PTK6Q13882 451 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 UGCGQ16739 394 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 WDR78Q5VTH9 848 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 ATL2Q8NHH9 583 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 CHURC1Q8WUH1 139 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 STMN2Q93045 179 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 AGBL1Q96MI9 1066 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 NINJ2Q9NZG7 142 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 SYNPO2Q9UMS6 1093 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 CHMP2BQ9UQN3 213 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 PCDHGA4Q9Y5G9 962 aa13.12□□□□□ -0.31
CCDC78-213ENST00000482878 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-213ENST00000482878 GJB6O95452 261 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 CBX6O95503 412 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 FAM163BP0C2L3 166 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 MAGEA10P43363 369 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-213ENST00000482878 QARSP47897 775 aaKnown RBP13.11□□□□□ -0.31
CCDC78-213ENST00000482878 RASSF2P50749 326 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 GPC3P51654 580 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 USP46P62068 366 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 CLEC16AQ2KHT3 1053 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 CGB2Q6NT52 195 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 FBXO41Q8TF61 875 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 HIC2Q96JB3 615 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 PI4K2AQ9BTU6 479 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 HEMGNQ9BXL5 484 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 DCLK3Q9C098 648 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 RMI1Q9H9A7 625 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 COQ4Q9Y3A0 265 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 MAGEA13PA6NCF6 341 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 HNRNPRO43390 633 aaKnown RBP13.11□□□□□ -0.31
CCDC78-213ENST00000482878 KRT5P13647 590 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 ADCY8P40145 1251 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 MTA1Q13330 715 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 OLFML2BQ68BL8 750 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 C7orf43Q8WVR3 580 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 NT5C1BQ96P26 610 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 PLVAPQ9BX97 442 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 PHACTR1Q9C0D0 580 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 KIAA1683Q9H0B3 1180 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 DENND2DQ9H6A0 471 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-213ENST00000482878 TMEM8AQ9HCN3 771 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 RAB20Q9NX57 234 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 ANAPC5Q9UJX4 755 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 MROH7Q68CQ1 1323 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 ANKRD31Q8N7Z5 1873 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 ATF2P15336 505 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 CC2D2BQ6DHV5 1058 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 RNF168Q8IYW5 571 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-213ENST00000482878 SNRNP27Q8WVK2 155 aaKnown RBP13.11□□□□□ -0.31
CCDC78-213ENST00000482878 GLIS2Q9BZE0 524 aaPredicted RBP13.11□□□□□ -0.31
CCDC78-213ENST00000482878 ST6GALNAC4Q9H4F1 302 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 DCLRE1BQ9H816 532 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 PRKAG3Q9UGI9 489 aa13.11□□□□□ -0.31
CCDC78-213ENST00000482878 NFIBO00712 420 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 RRM1P23921 792 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 ATP5DP30049 168 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 NCKAP1LP55160 1127 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 MGAT5Q09328 741 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 FAM102BQ5T8I3 360 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 PLA2G4FQ68DD2 849 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 RFX8Q6ZV50 586 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 PRUNE1Q86TP1 453 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 FBXL13Q8NEE6 735 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 CPA5Q8WXQ8 436 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 JDP2Q8WYK2 163 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 ZNF333Q96JL9 665 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 AGO4Q9HCK5 861 aaKnown RBP13.1□□□□□ -0.31
CCDC78-213ENST00000482878 TBX20Q9UMR3 447 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 NAALADL1Q9UQQ1 740 aa13.1□□□□□ -0.31
CCDC78-213ENST00000482878 CAPN9O14815 690 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms