RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 LHX1P48742 406 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 NOP14P78316 857 aaKnown RBP16.45■□□□□ 0.22
CCM2-215ENST00000482714 DSG1Q02413 1049 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 CREMQ03060 361 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 PTPROQ16827 1216 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 KIAA0319Q5VV43 1072 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 SARM1Q6SZW1 724 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 ANKS3Q6ZW76 656 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 VPS52Q8N1B4 723 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 THEM5Q8N1Q8 247 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 ARNTL2Q8WYA1 636 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 DNAI2Q9GZS0 605 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 NIF3L1Q9GZT8 377 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 PLCB1Q9NQ66 1216 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 GCNT4Q9P109 453 aa16.45■□□□□ 0.22
CCM2-215ENST00000482714 SCN1AP35498 2009 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 POU3F3P20264 500 aaPredicted RBP16.44■□□□□ 0.22
CCM2-215ENST00000482714 RFX1P22670 979 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 GCNT1Q02742 428 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 YWHAHQ04917 246 aaPredicted RBP16.44■□□□□ 0.22
CCM2-215ENST00000482714 KCNMA1Q12791 1236 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 SCARA3Q6AZY7 606 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 TRIM65Q6PJ69 517 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 HASPINQ8TF76 798 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 BCL7CQ8WUZ0 217 aaPredicted RBP16.44■□□□□ 0.22
CCM2-215ENST00000482714 PIK3R5Q8WYR1 880 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 LRCH3Q96II8 777 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 FAM84AQ96KN4 292 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 MMS19Q96T76 1030 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 ALG13Q9NP73 1137 aaKnown RBP16.44■□□□□ 0.22
CCM2-215ENST00000482714 TLR9Q9NR96 1032 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 MRPL17Q9NRX2 175 aaKnown RBP16.44■□□□□ 0.22
CCM2-215ENST00000482714 NXF1Q9UBU9 619 aaKnown RBP16.44■□□□□ 0.22
CCM2-215ENST00000482714 FBXL5Q9UKA1 691 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 BACE2Q9Y5Z0 518 aa16.44■□□□□ 0.22
CCM2-215ENST00000482714 GBF1Q92538 1859 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 GABRDO14764 452 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 LILRB3O75022 631 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 URODP06132 367 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 SLC9A1P19634 815 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 IGFBP6P24592 240 aaPredicted RBP16.43■□□□□ 0.22
CCM2-215ENST00000482714 GLUD2P49448 558 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 YWHAEP62258 255 aaKnown RBP16.43■□□□□ 0.22
CCM2-215ENST00000482714 SOWAHAQ2M3V2 549 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 ZNF697Q5TEC3 545 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 TMC7Q7Z402 723 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 UNC93AQ86WB7 457 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 MRPL43Q8N983 215 aaKnown RBP16.43■□□□□ 0.22
CCM2-215ENST00000482714 IQCDQ96DY2 449 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 NAP1L5Q96NT1 182 aaPredicted RBP16.43■□□□□ 0.22
CCM2-215ENST00000482714 CRACR2AQ9BSW2 395 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 BCO2Q9BYV7 579 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 INTS2Q9H0H0 1204 aaKnown RBP16.43■□□□□ 0.22
CCM2-215ENST00000482714 ZBP1Q9H171 429 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 FNIP2Q9P278 1114 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 MTUS1Q9ULD2 1270 aa16.43■□□□□ 0.22
CCM2-215ENST00000482714 F8W810 466 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 GRM6O15303 877 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 LPXNO60711 386 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 CXCL14O95715 111 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 TRIM21P19474 475 aaKnown RBP16.42■□□□□ 0.22
CCM2-215ENST00000482714 WARSP23381 471 aaKnown RBP16.42■□□□□ 0.22
CCM2-215ENST00000482714 MFAP3P55082 362 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 SMC1AQ14683 1233 aaKnown RBP16.42■□□□□ 0.22
CCM2-215ENST00000482714 TAS1R1Q7RTX1 841 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 LNX1Q8TBB1 728 aaPredicted RBP16.42■□□□□ 0.22
CCM2-215ENST00000482714 TATDN2Q93075 761 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 ACBD6Q9BR61 282 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 PI4K2AQ9BTU6 479 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 NUP58Q9BVL2 599 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 VN1R3Q9BXE9 311 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 RXFP1Q9HBX9 757 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 APOBEC3GQ9HC16 384 aaKnown RBP16.42■□□□□ 0.22
CCM2-215ENST00000482714 APEX2Q9UBZ4 518 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 MYO9BQ13459 2157 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 OR6C75A6NL08 312 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 FSCN2O14926 492 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 GNL1P36915 607 aaPredicted RBP16.42■□□□□ 0.22
CCM2-215ENST00000482714 SMARCB1Q12824 385 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 CUL2Q13617 745 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 CAMK1Q14012 370 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 VARS2Q5ST30 1063 aaKnown RBP16.42■□□□□ 0.22
CCM2-215ENST00000482714 KLHDC7AQ5VTJ3 777 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 WSCD1Q658N2 575 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 OVOS1Q6IE37 1185 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 PHLDB3Q6NSJ2 640 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 CEP57Q86XR8 500 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 TMEM130Q8N3G9 435 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 PDCL2Q8N4E4 241 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 PPP2R3CQ969Q6 453 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 TCF25Q9BQ70 676 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 EDEM3Q9BZQ6 932 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 CERS4Q9HA82 394 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 IFNKQ9P0W0 207 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 L1RE1Q9UN81 338 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 SIK3Q9Y2K2 1263 aa16.42■□□□□ 0.22
CCM2-215ENST00000482714 I3L4J1 428 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 TEX33O43247 280 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 TBC1D4O60343 1298 aa16.41■□□□□ 0.22
CCM2-215ENST00000482714 LRRN2O75325 713 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms