RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 USP41Q3LFD5 358 aa21.39■■□□□ 1.01
TRAPPC12-220ENST00000482645 SCARA5Q6ZMJ2 495 aa21.39■■□□□ 1.01
TRAPPC12-220ENST00000482645 CRACR2AQ9BSW2 395 aa21.39■■□□□ 1.01
TRAPPC12-220ENST00000482645 HERC2P3Q9BVR0 1158 aa21.39■■□□□ 1.01
TRAPPC12-220ENST00000482645 XYLT2Q9H1B5 865 aa21.39■■□□□ 1.01
TRAPPC12-220ENST00000482645 PCDHGC5Q9Y5F6 944 aa21.39■■□□□ 1.01
TRAPPC12-220ENST00000482645 URODP06132 367 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 ODC1P11926 461 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 IRS1P35568 1242 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 AARSP49588 968 aaKnown RBP eCLIP21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 NOP14P78316 857 aaKnown RBP21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 LRMPQ12912 555 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 NR1I3Q14994 352 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 ZNF667Q5HYK9 610 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 RTP2Q5QGT7 225 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 MRFAP1L1Q96HT8 127 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 TTPALQ9BTX7 342 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 ZBP1Q9H171 429 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 GCNT4Q9P109 453 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 PCDHB8Q9UN66 801 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 POLIQ9UNA4 740 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 VWA8A3KMH1 1905 aa21.38■■□□□ 1.01
TRAPPC12-220ENST00000482645 M0QZQ0 153 aa21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 LPXNO60711 386 aa21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 HUS1O60921 280 aa21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 ASS1P00966 412 aaKnown RBP21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 GLUD2P49448 558 aa21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 CAMK1Q14012 370 aa21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 WDR44Q5JSH3 913 aa21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 RNF168Q8IYW5 571 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 RIN2Q8WYP3 895 aaPredicted RBP21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 STK39Q9UEW8 545 aa21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 MYO7AQ13402 2215 aa21.37■■□□□ 1.01
TRAPPC12-220ENST00000482645 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 P4HA2O15460 535 aa21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 EFEMP2O95967 443 aa21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 BMS1Q14692 1282 aaKnown RBP21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 PTPROQ16827 1216 aa21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 PRSS55Q6UWB4 352 aaPredicted RBP21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 DEFB123Q8N688 67 aa21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 APPL2Q8NEU8 664 aa21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 MRPL17Q9NRX2 175 aaKnown RBP21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 COQ4Q9Y3A0 265 aa21.36■■□□□ 1.01
TRAPPC12-220ENST00000482645 SYN3O14994 580 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 CXCL14O95715 111 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 STAU1O95793 577 aaKnown RBP21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 CTSAP10619 480 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 FGFR3P22607 806 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 IGFBP4P22692 258 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 PAX3P23760 479 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 YWHAHQ04917 246 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 VARS2Q5ST30 1063 aaKnown RBP21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 WSCD1Q658N2 575 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 GPR153Q6NV75 609 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 GBP6Q6ZN66 633 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 TAF4BQ92750 862 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 PCMTD1Q96MG8 357 aaPredicted RBP21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 INTS2Q9H0H0 1204 aaKnown RBP21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 SMYD3Q9H7B4 428 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 APOBEC3GQ9HC16 384 aaKnown RBP21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 CHST7Q9NS84 486 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 GDAP2Q9NXN4 497 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 L1RE1Q9UN81 338 aa21.35■■□□□ 1.01
TRAPPC12-220ENST00000482645 ARHGEF37A1IGU5 675 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 PMM2O15305 246 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 P4HA1P13674 534 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 RAP1GAPP47736 663 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 DSG1Q02413 1049 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 SMC1AQ14683 1233 aaKnown RBP21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 SYCP1Q15431 976 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 METTL23Q86XA0 190 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 GLYCTKQ8IVS8 523 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 DRC7Q8IY82 874 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 ADGRF2Q8IZF7 708 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 PDCL2Q8N4E4 241 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 MRPL38Q96DV4 380 aaKnown RBP21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 GAS2L1Q99501 681 aaPredicted RBP21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 LMAN2LQ9H0V9 348 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 VRTNQ9H8Y1 702 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 HIDE1A8MVS5 230 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 RPL17P18621 184 aaKnown RBP21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 CDC25BP30305 580 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 KLK7P49862 253 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 PTPN14Q15678 1187 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 PSMD5Q16401 504 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 EXOC3L4Q17RC7 722 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 SOWAHAQ2M3V2 549 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 OVOS1Q6IE37 1185 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 VSTM4Q8IW00 320 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 TOP6BLQ8N6T0 577 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 EHBP1Q8NDI1 1231 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 TATDN2Q93075 761 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 NIF3L1Q9GZT8 377 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 NGRNQ9NPE2 291 aaKnown RBP21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 DSEQ9UL01 958 aa21.34■■□□□ 1.01
TRAPPC12-220ENST00000482645 TSC2P49815 1807 aa21.33■■□□□ 1.01
TRAPPC12-220ENST00000482645 SLC9A1P19634 815 aa21.33■■□□□ 1
TRAPPC12-220ENST00000482645 PBX1P40424 430 aa21.33■■□□□ 1
TRAPPC12-220ENST00000482645 ADGRE1Q14246 886 aa21.33■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms