RNA–Protein interactions for RNA: ENST00000482236.5

SORT1-204, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-204ENST00000482236 RESP18Q5W5W9 173 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 ASTLQ6HA08 431 aaPredicted RBP12.11□□□□□ -0.47
SORT1-204ENST00000482236 UNC13DQ70J99 1090 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 ITIH5Q86UX2 942 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 YAF2Q8IY57 180 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 TCEAL8Q8IYN2 117 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 DCP1BQ8IZD4 617 aaKnown RBP12.11□□□□□ -0.47
SORT1-204ENST00000482236 LEMD2Q8NC56 503 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 ATOH1Q92858 354 aaPredicted RBP12.11□□□□□ -0.47
SORT1-204ENST00000482236 KCNN1Q92952 543 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 MTMR12Q9C0I1 747 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 IRF2BPLQ9H1B7 796 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 ABI2Q9NYB9 513 aaPredicted RBP12.11□□□□□ -0.47
SORT1-204ENST00000482236 MAFFQ9ULX9 164 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 ARIH1Q9Y4X5 557 aaPredicted RBP12.11□□□□□ -0.47
SORT1-204ENST00000482236 STYXL1Q9Y6J8 313 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 UBE4BO95155 1302 aa12.11□□□□□ -0.47
SORT1-204ENST00000482236 FRMD3A2A2Y4 597 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 KPNA7A9QM74 516 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 DPYSL4O14531 572 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 EIF3DO15371 548 aaKnown RBP eCLIP12.1□□□□□ -0.47
SORT1-204ENST00000482236 PHACTR2O75167 634 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 ABLIM3O94929 683 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 OAZ2O95190 189 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 POU2F2P09086 479 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 CEBPBP17676 345 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 TNNI1P19237 187 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 ADSSP30520 456 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 CDR1P51861 262 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 RBP5P82980 135 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 MYL7Q01449 175 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 PFKPQ01813 784 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 POU5F1Q01860 360 aaKnown RBP12.1□□□□□ -0.47
SORT1-204ENST00000482236 DUSP4Q13115 394 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 HTR4Q13639 388 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 MYBPC2Q14324 1141 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 ZBTB6Q15916 424 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 E2F4Q16254 413 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 LMBRD2Q68DH5 695 aaPredicted RBP12.1□□□□□ -0.47
SORT1-204ENST00000482236 NPAS3Q8IXF0 933 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 EFCAB13Q8IY85 973 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 GRAMD1CQ8IYS0 662 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 SLC44A3Q8N4M1 653 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 RDH13Q8NBN7 331 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 GPR152Q8TDT2 470 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 CCDC127Q96BQ5 260 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 SHDQ96IW2 340 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 FGFBP2Q9BYJ0 223 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 SCAND2PQ9GZW5 306 aaPredicted RBP12.1□□□□□ -0.47
SORT1-204ENST00000482236 KIAA1586Q9HCI6 787 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 PDE11AQ9HCR9 933 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 SLC39A2Q9NP94 309 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 ARHGEF3Q9NR81 526 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 KBTBD4Q9NVX7 518 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 GDE1Q9NZC3 331 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 HSPBP1Q9NZL4 362 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 ITGA11Q9UKX5 1188 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 SLC27A5Q9Y2P5 690 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 DENND4AQ7Z401 1863 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 C5orf42Q9H799 3197 aa12.1□□□□□ -0.47
SORT1-204ENST00000482236 MYH15Q9Y2K3 1946 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 C2orf16Q68DN1 1984 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 A0A1B0GVL5 298 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 CLIC2O15247 247 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 EXOC3O60645 756 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 SEC24AO95486 1093 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 PFKFB1P16118 471 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 CASP1P29466 404 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 SYKP43405 635 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 AARSP49588 968 aaKnown RBP eCLIP12.09□□□□□ -0.47
SORT1-204ENST00000482236 GPR17Q13304 367 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 BIRC3Q13489 604 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 TRPC3Q13507 836 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 MRPL58Q14197 206 aaKnown RBP12.09□□□□□ -0.47
SORT1-204ENST00000482236 WSCD1Q658N2 575 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 PARM1Q6UWI2 310 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 GOLGA5Q8TBA6 731 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 MMS19Q96T76 1030 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 C7orf25Q9BPX7 421 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 RTP3Q9BQQ7 232 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 TBC1D17Q9HA65 648 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 SERTAD1Q9UHV2 236 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 SNX9Q9Y5X1 595 aa12.09□□□□□ -0.47
SORT1-204ENST00000482236 VWA8A3KMH1 1905 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 PVALEFA0A1B0GWK0 134 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 MTMR11A4FU01 709 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 PIRO00625 290 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 SPTLC1O15269 473 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 PRPF40AO75400 957 aaKnown RBP12.08□□□□□ -0.48
SORT1-204ENST00000482236 KIF20AO95235 890 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 FGF19O95750 216 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 SLFN14P0C7P3 912 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 TUFMP49411 452 aaKnown RBP12.08□□□□□ -0.48
SORT1-204ENST00000482236 TNNC1P63316 161 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 CUL4BQ13620 913 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 UBXN2BQ14CS0 331 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 SNRNP35Q16560 246 aaKnown RBP12.08□□□□□ -0.48
SORT1-204ENST00000482236 DUOXA2Q1HG44 320 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 CNNM4Q6P4Q7 775 aa12.08□□□□□ -0.48
SORT1-204ENST00000482236 CBWD2Q8IUF1 395 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms