RNA–Protein interactions for RNA: ENST00000482227.5

CNKSR1-207, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-207ENST00000482227 FBXO27Q8NI29 283 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 TCP10LQ8TDR4 215 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 SEMA4DQ92854 862 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 FAM163AQ96GL9 167 aaPredicted RBP16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 CCDC28BQ9BUN5 200 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 TMEM120AQ9BXJ8 343 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 TRIM55Q9BYV6 548 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 ALG13Q9NP73 1137 aaKnown RBP16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 SSU72Q9NP77 194 aaKnown RBP16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 CHCHD3Q9NX63 227 aaKnown RBP16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 WRAP73Q9P2S5 460 aaPredicted RBP16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 SLC17A7Q9P2U7 560 aa16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 PSMC3IPQ9P2W1 217 aaPredicted RBP16.41■□□□□ 0.22
CNKSR1-207ENST00000482227 DNALI1O14645 258 aaPredicted RBP16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 RNASEH1O60930 286 aaKnown RBP16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 CALCAP01258 141 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 ESRRAP11474 423 aaPredicted RBP16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 ANPEPP15144 967 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 PGM1P36871 562 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 SLC1A1P43005 524 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 SNAP25P60880 206 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 MYBPC2Q14324 1141 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 STXBP4Q6ZWJ1 553 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 ECSITQ9BQ95 431 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 CBWD1Q9BRT8 395 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 MANSC1Q9H8J5 431 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 LARSQ9P2J5 1176 aaKnown RBP16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 SLC24A2Q9UI40 661 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 TAF1LQ8IZX4 1826 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 PIAS1O75925 651 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 DLDP09622 509 aaKnown RBP16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 SLURP2P0DP57 97 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 TAL1P17542 331 aaPredicted RBP16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 ERFP50548 548 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 DSG1Q02413 1049 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 CEP128Q6ZU80 1094 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 OTOP1Q7RTM1 612 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 GSTA5Q7RTV2 222 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 DAW1Q8N136 415 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 KCTD17Q8N5Z5 321 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 IWS1Q96ST2 819 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 OSBPL8Q9BZF1 889 aa16.4■□□□□ 0.22
CNKSR1-207ENST00000482227 GAKO14976 1311 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 ALOX15BO15296 676 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 PENKP01210 267 aaPredicted RBP16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 CRABP2P29373 138 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 SHMT1P34896 483 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 GPX6P59796 221 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 MYBPC3Q14896 1274 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 EFTUD2Q15029 972 aaKnown RBP eCLIP16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 CLEC16AQ2KHT3 1053 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 ZBED8Q8IZ13 594 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 FNBP1Q96RU3 617 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 CDCA7Q9BWT1 371 aaPredicted RBP16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 VPS11Q9H270 941 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 PREBQ9HCU5 417 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 TUFT1Q9NNX1 390 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 ARMCX1Q9P291 453 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 ANGPTL2Q9UKU9 493 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 COMMD3-BMI1R4GMX3 469 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 F8W8V4 182 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 CHMP2AO43633 222 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 ETS1P14921 441 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 CPA2P48052 419 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 MXI1P50539 228 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 INHBCP55103 352 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 ZBTB16Q05516 673 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 CDC16Q13042 620 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 EFHC2Q5JST6 749 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 MZB1Q8WU39 189 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 ELMO3Q96BJ8 720 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 FAM161BQ96MY7 647 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 CD209Q9NNX6 404 aa16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 DDX4Q9NQI0 724 aaKnown RBP16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 MTO1Q9Y2Z2 717 aaKnown RBP16.39■□□□□ 0.21
CNKSR1-207ENST00000482227 IGLV3-22A0A075B6J6 115 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 MAGEC1O60732 1142 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 BANF1O75531 89 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 TAS2R40P59535 323 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 NOP14P78316 857 aaKnown RBP16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 PTP4A2Q12974 167 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 C2CD6Q53TS8 623 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 MYLK4Q86YV6 388 aaPredicted RBP16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 HELQQ8TDG4 1101 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 DHX38Q92620 1227 aaKnown RBP16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 TSSK1BQ9BXA7 367 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 PHACTR1Q9C0D0 580 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 NMUR2Q9GZQ4 415 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 GOLGA8RI6L899 631 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 FCHO1O14526 889 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 HOXA13P31271 388 aaPredicted RBP16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 MFAP3P55082 362 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 CCDC62Q6P9F0 684 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 MARK2Q7KZI7 788 aaKnown RBP16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 BANPQ8N9N5 519 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 PANX3Q96QZ0 392 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 KLF6Q99612 283 aaPredicted RBP16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 CENPKQ9BS16 269 aa16.38■□□□□ 0.21
CNKSR1-207ENST00000482227 RABGEF1Q9UJ41 708 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms