RNA–Protein interactions for RNA: ENST00000481353.5

PDCD4-206, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 1,120 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-206ENST00000481353 CDK5RAP3Q96JB5 506 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 CCDC138Q96M89 665 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 TMEM209Q96SK2 561 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 SOX7Q9BT81 388 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 TUBB2BQ9BVA1 445 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 PPCSQ9HAB8 311 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 KCNK12Q9HB15 430 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.48□□□□□ -0.89
PDCD4-206ENST00000481353 ZNF215Q9UL58 517 aaPredicted RBP9.48□□□□□ -0.89
PDCD4-206ENST00000481353 TPCN1Q9ULQ1 816 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 NR2E3Q9Y5X4 410 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 TSPOAP1O95153 1857 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 IGSF1Q8N6C5 1336 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 PTPRUQ92729 1446 aa9.48□□□□□ -0.89
PDCD4-206ENST00000481353 CPS1P31327 1500 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 EFCAB8A8MWE9 144 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 HRKO00198 91 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 ZSCAN12O43309 604 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 FTLP02792 175 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-206ENST00000481353 MEF2AQ02078 507 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-206ENST00000481353 RESTQ13127 1097 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 RAPGEF1Q13905 1077 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 POLD3Q15054 466 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-206ENST00000481353 ZNF124Q15973 351 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 TMEM95Q3KNT9 176 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 CCDC93Q567U6 631 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 FAM180AQ6UWF9 173 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 LMBR1LQ6UX01 489 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 CD300LDQ6UXZ3 194 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 APBB1IPQ7Z5R6 666 aaPredicted RBP9.47□□□□□ -0.89
PDCD4-206ENST00000481353 MSL3Q8N5Y2 521 aaKnown RBP9.47□□□□□ -0.89
PDCD4-206ENST00000481353 VPS37AQ8NEZ2 397 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 GPR156Q8NFN8 814 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 DNAAF4Q8WXU2 420 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 PPM1EQ8WY54 764 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 KAT5Q92993 513 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 C7orf25Q9BPX7 421 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 SELENOOQ9BVL4 669 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 PSD3Q9NYI0 1048 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 RTEL1Q9NZ71 1219 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 FNIP2Q9P278 1114 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 ARHGAP20Q9P2F6 1191 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 NRBP1Q9UHY1 535 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 PCDHB1Q9Y5F3 818 aa9.47□□□□□ -0.89
PDCD4-206ENST00000481353 RIMBP3CA6NJZ7 1639 aa9.46□□□□□ -0.89
PDCD4-206ENST00000481353 RIMBP3BA6NNM3 1639 aa9.46□□□□□ -0.89
PDCD4-206ENST00000481353 RIMBP3Q9UFD9 1639 aa9.46□□□□□ -0.89
PDCD4-206ENST00000481353 RASA4BC9J798 803 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 RASA4O43374 803 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 FRS3O43559 492 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 MGEA5O60502 916 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 IL18BPO95998 194 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 SFPQP23246 707 aaKnown RBP eCLIP9.46□□□□□ -0.9
PDCD4-206ENST00000481353 PAX3P23760 479 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 TRAPPC10P48553 1259 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 CACNB2Q08289 660 aaPredicted RBP9.46□□□□□ -0.9
PDCD4-206ENST00000481353 STK3Q13188 491 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 G3BP1Q13283 466 aaKnown RBP eCLIP9.46□□□□□ -0.94e-14■■■■■ 27.2
PDCD4-206ENST00000481353 CCDC158Q5M9N0 1113 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 OLFML2BQ68BL8 750 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 FBXO38Q6PIJ6 1188 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 DPP8Q6V1X1 898 aaPredicted RBP9.46□□□□□ -0.9
PDCD4-206ENST00000481353 ZSWIM9Q86XI8 627 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 TBCBQ99426 244 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 MPHOSPH8Q99549 860 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 APOL5Q9BWW9 433 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 UBA5Q9GZZ9 404 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 PLA2G2DQ9UNK4 145 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.46□□□□□ -0.96e-8■□□□□ 9.1
PDCD4-206ENST00000481353 AGLP35573 1532 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 DIP2AQ14689 1571 aa9.46□□□□□ -0.9
PDCD4-206ENST00000481353 SETD1AO15047 1707 aaKnown RBP9.45□□□□□ -0.9
PDCD4-206ENST00000481353 NALCNQ8IZF0 1738 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 BIN1O00499 593 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 TMEM127O75204 238 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 LARGE1O95461 756 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 C8BP07358 591 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 AMPHP49418 695 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 RAB1AP62820 205 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 CCZ1BP86790 482 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 CCZ1P86791 482 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-206ENST00000481353 CD83Q01151 205 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 PTH1RQ03431 593 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 BTKQ06187 659 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 BEND3Q5T5X7 828 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 DPP9Q86TI2 863 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 IRF2BP1Q8IU81 584 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 MNS1Q8NEH6 495 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.45□□□□□ -0.9
PDCD4-206ENST00000481353 SMARCC2Q8TAQ2 1214 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 DEPTORQ8TB45 409 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 HOXB13Q92826 284 aaPredicted RBP9.45□□□□□ -0.9
PDCD4-206ENST00000481353 GTF3C6Q969F1 213 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 DYDC2Q96IM9 177 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 KIRREL1Q96J84 757 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 PGBD1Q96JS3 809 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 NEK1Q96PY6 1258 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 OSBPL6Q9BZF3 934 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 BTBD1Q9H0C5 482 aa9.45□□□□□ -0.9
PDCD4-206ENST00000481353 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms