RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 MAKP20794 623 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 ZNF135P52742 658 aaPredicted RBP4.73□□□□□ -1.65
CBX3-207ENST00000481300 INHBCP55103 352 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 MXRA7P84157 204 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 BRD3Q15059 726 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 SMN1Q16637 294 aaKnown RBP4.73□□□□□ -1.65
CBX3-207ENST00000481300 EMC10Q5UCC4 262 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 C1QL3Q5VWW1 255 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 TSHZ3Q63HK5 1081 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 PCSK4Q6UW60 755 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 Q6ZPA2 131 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 SPATA31D4Q6ZUB0 917 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 HTR3DQ70Z44 454 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 COL23A1Q86Y22 540 aaPredicted RBP4.73□□□□□ -1.65
CBX3-207ENST00000481300 SYT12Q8IV01 421 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 CELF5Q8N6W0 485 aaKnown RBP4.73□□□□□ -1.65
CBX3-207ENST00000481300 SLC17A8Q8NDX2 589 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 IL31RAQ8NI17 732 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 NUP133Q8WUM0 1156 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 DDX17Q92841 729 aaKnown RBP4.73□□□□□ -1.65
CBX3-207ENST00000481300 SUCLG2Q96I99 432 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 APOL5Q9BWW9 433 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 IMPG2Q9BZV3 1241 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 ATP6V0A4Q9HBG4 840 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 KIAA1586Q9HCI6 787 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 OGDHLQ9ULD0 1010 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 SLC45A2Q9UMX9 530 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 SORCS3Q9UPU3 1222 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 ATP11BQ9Y2G3 1177 aa4.73□□□□□ -1.65
CBX3-207ENST00000481300 USP15Q9Y4E8 981 aaPredicted RBP4.73□□□□□ -1.65
CBX3-207ENST00000481300 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.73□□□□□ -1.65
CBX3-207ENST00000481300 XDHP47989 1333 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 A0A087X1B8 175 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 ISM1B1AKI9 464 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 LEFTY2O00292 366 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 SCAF4O95104 1147 aaKnown RBP4.72□□□□□ -1.65
CBX3-207ENST00000481300 CHEK2O96017 543 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 IFIT2P09913 472 aaKnown RBP4.72□□□□□ -1.65
CBX3-207ENST00000481300 NPR1P16066 1061 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 KRT4P19013 534 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 HDCP19113 662 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 GCSHP23434 173 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 INHBEP58166 350 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 RNASE9P60153 205 aaKnown RBP4.72□□□□□ -1.65
CBX3-207ENST00000481300 TOB2Q14106 344 aaPredicted RBP4.72□□□□□ -1.65
CBX3-207ENST00000481300 SYCP2LQ5T4T6 812 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 IL31Q6EBC2 164 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 FOXR2Q6PJQ5 311 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 ZNF783Q6ZMS7 281 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 RHOT2Q8IXI1 618 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 TMIEQ8NEW7 156 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 OR6B3Q8NGW1 331 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 CPT1CQ8TCG5 803 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 FBXO41Q8TF61 875 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 ANKS1AQ92625 1134 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 SCAMP4Q969E2 229 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 APIPQ96GX9 242 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 MRGPRX1Q96LB2 322 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 P2RX7Q99572 595 aaKnown RBP4.72□□□□□ -1.65
CBX3-207ENST00000481300 RNPEPQ9H4A4 650 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 ZNF287Q9HBT7 754 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 TRPM5Q9NZQ8 1165 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.72□□□□□ -1.65
CBX3-207ENST00000481300 CDYLQ9Y232 598 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 REXO2Q9Y3B8 237 aaKnown RBP4.72□□□□□ -1.65
CBX3-207ENST00000481300 SNX13Q9Y5W8 968 aa4.72□□□□□ -1.65
CBX3-207ENST00000481300 RHPN2P1A8MT19 583 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 MYO1CO00159 1063 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 TRIM24O15164 1050 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 TBC1D4O60343 1298 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 PEX11BO96011 259 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 MYL3P08590 195 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 RPL17P18621 184 aaKnown RBP4.71□□□□□ -1.66
CBX3-207ENST00000481300 NEK3P51956 506 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 PIGFQ07326 219 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 ZNF844Q08AG5 666 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 IFIT5Q13325 482 aaKnown RBP4.71□□□□□ -1.66
CBX3-207ENST00000481300 UBE4AQ14139 1066 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 CNGA2Q16280 664 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 SLC44A4Q53GD3 710 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 NOMO2Q5JPE7 1267 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 FAM102AQ5T9C2 384 aaPredicted RBP4.71□□□□□ -1.66
CBX3-207ENST00000481300 AGAP9Q5VTM2 703 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 GDF7Q7Z4P5 450 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 KRT78Q8N1N4 520 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 OR56A1Q8NGH5 318 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 KBTBD7Q8WVZ9 684 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 MARS2Q96GW9 593 aaKnown RBP4.71□□□□□ -1.66
CBX3-207ENST00000481300 TNIP3Q96KP6 325 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 KLHL32Q96NJ5 620 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 PNKPQ96T60 521 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 TRIM54Q9BYV2 358 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 TINAGL1Q9GZM7 467 aaPredicted RBP4.71□□□□□ -1.66
CBX3-207ENST00000481300 GPR35Q9HC97 309 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 GPRC5BQ9NZH0 403 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 MED16Q9Y2X0 877 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 USP19O94966 1318 aa4.71□□□□□ -1.66
CBX3-207ENST00000481300 PRSS29PA6NIE9 313 aa4.7□□□□□ -1.66
CBX3-207ENST00000481300 M0QYG6 137 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms