RNA–Protein interactions for RNA: ENST00000481115.2

PKP4-211, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-211ENST00000481115 RAP1GDS1P52306 607 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 CASP7P55210 303 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 ASPHQ12797 758 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 COL9A3Q14050 684 aaPredicted RBP7.58□□□□□ -1.2
PKP4-211ENST00000481115 RPS6KA1Q15418 735 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 VWA3BQ502W6 1294 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 GNASQ5JWF2 1037 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 RRAGBQ5VZM2 374 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 ARL6IP4Q66PJ3 421 aaKnown RBP7.58□□□□□ -1.2
PKP4-211ENST00000481115 PACS1Q6VY07 963 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 THSD4Q6ZMP0 1018 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 AGMOQ6ZNB7 445 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 NET1Q7Z628 596 aaPredicted RBP7.58□□□□□ -1.2
PKP4-211ENST00000481115 RALYLQ86SE5 291 aaKnown RBP7.58□□□□□ -1.2
PKP4-211ENST00000481115 VSIG1Q86XK7 387 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 IRF2BP1Q8IU81 584 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 TMEM126BQ8IUX1 230 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 ZNF34Q8IZ26 560 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 TTC39CQ8N584 583 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 CSGALNACT2Q8N6G5 542 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 PI4KAP1Q8N8J0 262 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 ST13P5Q8NFI4 369 aaPredicted RBP7.58□□□□□ -1.2
PKP4-211ENST00000481115 CASP10Q92851 521 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 STMN2Q93045 179 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 ZNF669Q96BR6 464 aaPredicted RBP7.58□□□□□ -1.2
PKP4-211ENST00000481115 MFSD3Q96ES6 412 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 PRMT1Q99873 361 aaKnown RBP7.58□□□□□ -1.2
PKP4-211ENST00000481115 SIKE1Q9BRV8 207 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 HGH1Q9BTY7 390 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 DDX23Q9BUQ8 820 aaKnown RBP7.58□□□□□ -1.2
PKP4-211ENST00000481115 METTL22Q9BUU2 404 aaPredicted RBP7.58□□□□□ -1.2
PKP4-211ENST00000481115 TBC1D10AQ9BXI6 508 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 MTFR1LQ9H019 292 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 BOLA2Q9H3K6 86 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 CAAP1Q9H8G2 361 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 TAB2Q9NYJ8 693 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 UVRAGQ9P2Y5 699 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 PFDN2Q9UHV9 154 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 PNMA2Q9UL42 364 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 CTNND2Q9UQB3 1225 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 CHMP2BQ9UQN3 213 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 ZNF652Q9Y2D9 606 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 LAMB2P55268 1798 aa7.58□□□□□ -1.2
PKP4-211ENST00000481115 LRP5O75197 1615 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 MYH3P11055 1940 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 A0A088AWK7 358 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 FAM205CA6NFA0 338 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 TRIM75PA6NK02 468 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 ZNF701M0R085 212 aaPredicted RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 ZNF263O14978 683 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 CLASP2O75122 1294 aaKnown RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 BAIAP3O94812 1187 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 RHOBTB3O94955 611 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 GGPS1O95749 300 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 SERPING1P05155 500 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 NR3C2P08235 984 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 RARGP13631 454 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 TFE3P19532 575 aaPredicted RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 SERPINB3P29508 390 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 HALP42357 657 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 METAP2P50579 478 aaKnown RBP eCLIP7.57□□□□□ -1.2
PKP4-211ENST00000481115 RTP1P59025 263 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 POU5F1Q01860 360 aaKnown RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 PPARAQ07869 468 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 SSRP1Q08945 709 aaKnown RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 TRIM28Q13263 835 aaKnown RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 TCIRG1Q13488 830 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 NFIXQ14938 502 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 SUZ12Q15022 739 aaKnown RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 RCN1Q15293 331 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 NTRK3Q16288 839 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 USP41Q3LFD5 358 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 SLC9C1Q4G0N8 1177 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 C6orf163Q5TEZ5 329 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 TTC39BQ5VTQ0 682 aaPredicted RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 FYB2Q5VWT5 728 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 DUPD1Q68J44 220 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 PDXDC1Q6P996 788 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 C1orf228Q6PIY5 440 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 TPTE2Q6XPS3 522 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 NLRP9Q7RTR0 991 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 BTLAQ7Z6A9 289 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 PATL1Q86TB9 770 aaKnown RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 ZC3H18Q86VM9 953 aaKnown RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 THNSL2Q86YJ6 484 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 CCNJLQ8IV13 435 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 TRIM22Q8IYM9 498 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 ZSWIM2Q8NEG5 633 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 UCMAQ8WVF2 138 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 GAB3Q8WWW8 586 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 ANKS1AQ92625 1134 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 NINJ1Q92982 152 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 SLC7A6OSQ96CW6 309 aaPredicted RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 HSH2DQ96JZ2 352 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 AGBL1Q96MI9 1066 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 TUBGCP2Q9BSJ2 902 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 ISCA1Q9BUE6 129 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 FAM126AQ9BYI3 521 aaPredicted RBP7.57□□□□□ -1.2
PKP4-211ENST00000481115 TNKS2Q9H2K2 1166 aa7.57□□□□□ -1.2
PKP4-211ENST00000481115 CLK4Q9HAZ1 481 aaKnown RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms