RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 HPS3Q969F9 1004 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 ACSF2Q96CM8 615 aaPredicted RBP9.64□□□□□ -0.87
DDX56-211ENST00000479602 MYADMQ96S97 322 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 CLSTN3Q9BQT9 956 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 PAAF1Q9BRP4 392 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 CBWD1Q9BRT8 395 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 ANP32EQ9BTT0 268 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 COLEC11Q9BWP8 271 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 PRKD2Q9BZL6 878 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 VRTNQ9H8Y1 702 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 POLD4Q9HCU8 107 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 MAN1C1Q9NR34 630 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 DLGAP2Q9P1A6 1054 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 UBQLN1Q9UMX0 589 aaKnown RBP9.64□□□□□ -0.87
DDX56-211ENST00000479602 PRG3Q9Y2Y8 225 aaPredicted RBP9.64□□□□□ -0.87
DDX56-211ENST00000479602 DMXL1Q9Y485 3027 aa9.64□□□□□ -0.87
DDX56-211ENST00000479602 TRIP11Q15643 1979 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 TPRP12270 2363 aaKnown RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 PRR23AA6NEV1 266 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 ZNF233A6NK53 670 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 CETN3O15182 167 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 P4HA2O15460 535 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 MEFVO15553 781 aaPredicted RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 NARSO43776 548 aaKnown RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 GFRA3O60609 400 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 GLUD1P00367 558 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 URODP06132 367 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 FAM163BP0C2L3 166 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 LAMP2P13473 410 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 NR2F2P24468 414 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 IGFBP6P24592 240 aaPredicted RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 PSMC2P35998 433 aaKnown RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 OR1G1P47890 313 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 AARSP49588 968 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDX56-211ENST00000479602 ZNF445P59923 1031 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 TUSC3Q13454 348 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 CAMK4Q16566 473 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 USP41Q3LFD5 358 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 DPCR1Q3MIW9 517 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 RTP2Q5QGT7 225 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 CAVIN1Q6NZI2 390 aaKnown RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 FUT10Q6P4F1 479 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 SASS6Q6UVJ0 657 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 FRMD5Q7Z6J6 570 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 CCDC105Q8IYK2 499 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 PARD3BQ8TEW8 1205 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 RSAD2Q8WXG1 361 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 DDX27Q96GQ7 796 aaKnown RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 ZBTB45Q96K62 511 aaPredicted RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 B3GALT6Q96L58 329 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 FAM193BQ96PV7 902 aaPredicted RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 DUSP9Q99956 384 aaKnown RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 TCHPQ9BT92 498 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 NAT10Q9H0A0 1025 aaKnown RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 GZF1Q9H116 711 aaPredicted RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 THAP9Q9H5L6 903 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 RPF1Q9H9Y2 349 aaKnown RBP9.63□□□□□ -0.87
DDX56-211ENST00000479602 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDX56-211ENST00000479602 ZDHHC7Q9NXF8 308 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 SNTG2Q9NY99 539 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 ANKFY1Q9P2R3 1169 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 DPP7Q9UHL4 492 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 ADAM28Q9UKQ2 775 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 USP20Q9Y2K6 914 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 PLXNA3P51805 1871 aa9.63□□□□□ -0.87
DDX56-211ENST00000479602 DENND4AQ7Z401 1863 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 DOCK6Q96HP0 2047 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 SMIM28A0A1B0GU29 152 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 ANO9A1A5B4 782 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 GTPBP10A4D1E9 387 aaKnown RBP9.62□□□□□ -0.87
DDX56-211ENST00000479602 LRRC10BA6NIK2 292 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 C2CD2LO14523 706 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 STX10O60499 249 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 ZMYND10O75800 440 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 POU2F2P09086 479 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 TYRO3Q06418 890 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 CYP24A1Q07973 514 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 TMEM132AQ24JP5 1023 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 ZSCAN23Q3MJ62 389 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 SPATA1Q5VX52 437 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 POTEHQ6S545 545 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 CDR2LQ86X02 465 aaPredicted RBP9.62□□□□□ -0.87
DDX56-211ENST00000479602 LRRC52Q8N7C0 313 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 CEP120Q8N960 986 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 CXorf38Q8TB03 319 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 NELFBQ8WX92 580 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 PIK3R5Q8WYR1 880 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 MED15Q96RN5 788 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 RTP3Q9BQQ7 232 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 SLC2A4RGQ9NR83 387 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 RBAKQ9NYW8 714 aaPredicted RBP9.62□□□□□ -0.87
DDX56-211ENST00000479602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.62□□□□□ -0.87
DDX56-211ENST00000479602 ITGA11Q9UKX5 1188 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 FRMD4BQ9Y2L6 1034 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 COQ4Q9Y3A0 265 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 DAAM1Q9Y4D1 1078 aa9.62□□□□□ -0.87
DDX56-211ENST00000479602 CLUHO75153 1309 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 TISP43B9A030 160 aa9.61□□□□□ -0.87
DDX56-211ENST00000479602 EXOC3O60645 756 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms