RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 POLR3FQ9H1D9 316 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-209ENST00000479532 TNMDQ9H2S6 317 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 C17orf75Q9HAS0 396 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 PDLIM7Q9NR12 457 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 SUCLA2Q9P2R7 463 aaPredicted RBP6.79□□□□□ -1.32
SF3B1-209ENST00000479532 ODF2LQ9ULJ1 636 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 CYP8B1Q9UNU6 501 aa6.79□□□□□ -1.32
SF3B1-209ENST00000479532 A0A087WWV3 80 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 IGKV6-21A0A0C4DH24 114 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 FAM237AA0A1B0GTK4 181 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 TIMP1P01033 207 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 PFKMP08237 780 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 SLFN14P0C7P3 912 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 SCP2P22307 547 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 SFPQP23246 707 aaKnown RBP eCLIP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 GUCY2CP25092 1073 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 NDUFA8P51970 172 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 CRYBB1P53674 252 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 SLC12A3P55017 1021 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 RBL2Q08999 1139 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 NCBP1Q09161 790 aaKnown RBP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 DMP1Q13316 513 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 PPIGQ13427 754 aaKnown RBP eCLIP6.78□□□□□ -1.322e-7■□□□□ 8.4
SF3B1-209ENST00000479532 ZNF618Q5T7W0 954 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 RINT1Q6NUQ1 792 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 FAM117BQ6P1L5 589 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 RUFY4Q6ZNE9 571 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 FAM43BQ6ZT52 329 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 MAEAQ7L5Y9 396 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 KCNK18Q7Z418 384 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 ZBTB8OSQ8IWT0 167 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 CCDC65Q8IXS2 484 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 KIAA0319LQ8IZA0 1049 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 AGGF1Q8N302 714 aaeCLIP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 USP38Q8NB14 1042 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 SLC17A8Q8NDX2 589 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 FBXO27Q8NI29 283 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 DEPTORQ8TB45 409 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 TMEM143Q96AN5 459 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 NLRP4Q96MN2 994 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 TIGD1Q96MW7 591 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 KRTAP17-1Q9BYP8 105 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 CELF4Q9BZC1 486 aaKnown RBP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 GCOM2Q9BZD3 368 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 C2orf40Q9H1Z8 148 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 ZHX3Q9H4I2 956 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 SOX17Q9H6I2 414 aaPredicted RBP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 BLOC1S4Q9NUP1 217 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 LARSQ9P2J5 1176 aaKnown RBP6.78□□□□□ -1.32
SF3B1-209ENST00000479532 TBX21Q9UL17 535 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 GINS2Q9Y248 185 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 HPSEQ9Y251 543 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 COL4A3BPQ9Y5P4 624 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 CDY2AQ9Y6F7 541 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 SQORQ9Y6N5 450 aa6.78□□□□□ -1.32
SF3B1-209ENST00000479532 LRRIQ4A6NIV6 560 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 PRR19A6NJB7 356 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 CCDC169A6NNP5 214 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 HIP1RO75146 1068 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 ERLIN2O94905 339 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 ZNF202O95125 648 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 MBD3O95983 291 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 VTNP04004 478 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 IQCF3P0C7M6 154 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 SRGAP2CP0DJJ0 459 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 ACTN1P12814 892 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 IDEP14735 1019 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 GAP43P17677 238 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 CYP2C18P33260 490 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 ARL2P36404 184 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 NAMPTP43490 491 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 ARL4DP49703 201 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 GPC3P51654 580 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 CCL23P55773 120 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 NLRP11P59045 1033 aaKnown RBP6.77□□□□□ -1.33
SF3B1-209ENST00000479532 ASIC1P78348 528 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 FPGSQ05932 587 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 ZNF252P-AS1Q0IIN9 211 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 TMEM62Q0P6H9 643 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 C19orf57Q0VDD7 668 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 LAMTOR4Q0VGL1 99 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 PCBP1Q15365 356 aaKnown RBP eCLIP6.77□□□□□ -1.33
SF3B1-209ENST00000479532 KIZQ2M2Z5 673 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 TRIM71Q2Q1W2 868 aaKnown RBP6.77□□□□□ -1.33
SF3B1-209ENST00000479532 KLHL40Q2TBA0 621 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 RNF43Q68DV7 783 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 MFSD5Q6N075 450 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 KRBA2Q6ZNG9 492 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 TSHZ1Q6ZSZ6 1077 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 STXBP4Q6ZWJ1 553 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 C1orf186Q6ZWK4 172 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 DYMQ7RTS9 669 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 SRGAP1Q7Z6B7 1085 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 PDZD3Q86UT5 571 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 MYCT1Q8N699 235 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 LINC01465Q8N7H1 131 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 RNF149Q8NC42 400 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 PRPF31Q8WWY3 499 aaKnown RBP6.77□□□□□ -1.33
SF3B1-209ENST00000479532 GATAD2BQ8WXI9 593 aa6.77□□□□□ -1.33
SF3B1-209ENST00000479532 SEPT8Q92599 483 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms