RNA–Protein interactions for RNA: ENST00000479446.5

ABCA2-217, Transcript of ATP binding cassette subfamily A member 2, humanhuman

TSL 1 (best)

Gene ABCA2, Length 6,295 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA2-217ENST00000479446 COG4Q9H9E3 785 aa20.54■□□□□ 0.88
ABCA2-217ENST00000479446 ARHGEF38Q9NXL2 777 aa20.54■□□□□ 0.88
ABCA2-217ENST00000479446 CEMIPQ8WUJ3 1361 aa20.54■□□□□ 0.88
ABCA2-217ENST00000479446 CYP11B2P19099 503 aa20.54■□□□□ 0.88
ABCA2-217ENST00000479446 TTC39BQ5VTQ0 682 aaPredicted RBP20.54■□□□□ 0.88
ABCA2-217ENST00000479446 PLA2G4AP47712 749 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 PDK1Q15118 436 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 XRRA1Q6P2D8 792 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 KIF2BQ8N4N8 673 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 NSMCE4AQ9NXX6 385 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 PKD2L2Q9NZM6 624 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 AFF4Q9UHB7 1163 aaKnown RBP20.53■□□□□ 0.88
ABCA2-217ENST00000479446 ANO4Q32M45 955 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 C3orf20Q8ND61 904 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 DNAJC9Q8WXX5 260 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 TMA16Q96EY4 203 aaKnown RBP20.53■□□□□ 0.88
ABCA2-217ENST00000479446 MANSC1Q9H8J5 431 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 MYL2P10916 166 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 GTF2H1P32780 548 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 ATPAF2Q8N5M1 289 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 FAM151AQ8WW52 585 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 TRIM45Q9H8W5 580 aaPredicted RBP20.53■□□□□ 0.88
ABCA2-217ENST00000479446 EEF2KO00418 725 aaKnown RBP20.53■□□□□ 0.88
ABCA2-217ENST00000479446 POLBP06746 335 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 SLC40A1Q9NP59 571 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 KCNH7Q9NS40 1196 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 GPD1P21695 349 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 ACAD10Q6JQN1 1059 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 LZICQ8WZA0 190 aa20.53■□□□□ 0.88
ABCA2-217ENST00000479446 PPP4CP60510 307 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 PAPD7Q5XG87 772 aaKnown RBP20.52■□□□□ 0.88
ABCA2-217ENST00000479446 TRIM65Q6PJ69 517 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 E2F7Q96AV8 911 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 MOSPD1Q9UJG1 213 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 TSR3Q9UJK0 312 aaKnown RBP20.52■□□□□ 0.88
ABCA2-217ENST00000479446 SLC37A4O43826 429 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 TLR2O60603 784 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 ACADSBP45954 432 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 GEMIN4P57678 1058 aaKnown RBP20.52■□□□□ 0.88
ABCA2-217ENST00000479446 LRRC36Q1X8D7 754 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 TEX9Q8N6V9 391 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 ZNF280CQ8ND82 737 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 GPBP1L1Q9HC44 474 aaPredicted RBP20.52■□□□□ 0.88
ABCA2-217ENST00000479446 ZNF70Q9UC06 446 aaPredicted RBP20.52■□□□□ 0.88
ABCA2-217ENST00000479446 EPC2Q52LR7 807 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 COBLL1Q53SF7 1204 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 SPATA2LQ8IUW3 424 aaPredicted RBP20.52■□□□□ 0.88
ABCA2-217ENST00000479446 PI4K2AQ9BTU6 479 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 FUCA2Q9BTY2 467 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 INO80Q9ULG1 1556 aaPredicted RBP20.52■□□□□ 0.88
ABCA2-217ENST00000479446 IGF2BP3O00425 579 aaKnown RBP eCLIP20.52■□□□□ 0.88
ABCA2-217ENST00000479446 GRAP2O75791 330 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 ATF7IP2Q5U623 682 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 SCFD2Q8WU76 684 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 EME1Q96AY2 570 aa20.52■□□□□ 0.88
ABCA2-217ENST00000479446 PON1P27169 355 aa20.52■□□□□ 0.87
ABCA2-217ENST00000479446 HMOX2P30519 316 aa20.52■□□□□ 0.87
ABCA2-217ENST00000479446 PDAP1Q13442 181 aaKnown RBP20.52■□□□□ 0.87
ABCA2-217ENST00000479446 LAMB3Q13751 1172 aa20.52■□□□□ 0.87
ABCA2-217ENST00000479446 TTI2Q6NXR4 508 aa20.52■□□□□ 0.87
ABCA2-217ENST00000479446 RDM1Q8NG50 284 aa20.52■□□□□ 0.87
ABCA2-217ENST00000479446 MDM1Q8TC05 714 aa20.52■□□□□ 0.87
ABCA2-217ENST00000479446 GFM2Q969S9 779 aaKnown RBP20.52■□□□□ 0.87
ABCA2-217ENST00000479446 KDM4CQ9H3R0 1056 aa20.52■□□□□ 0.87
ABCA2-217ENST00000479446 C17orf75Q9HAS0 396 aa20.52■□□□□ 0.87
ABCA2-217ENST00000479446 FARP1Q9Y4F1 1045 aaPredicted RBP20.52■□□□□ 0.87
ABCA2-217ENST00000479446 PCYOX1LQ8NBM8 494 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 OR6J1Q8NGC5 347 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 KCNA3P22001 575 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 GRIK1P39086 918 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 TRIP10Q15642 601 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 NSL1Q96IY1 281 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 ELMO2Q96JJ3 720 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 PPP1R2P1Q96PQ5 205 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 ZBED2Q9BTP6 218 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 CCDC134Q9H6E4 229 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 KBTBD4Q9NVX7 518 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 L1RE1Q9UN81 338 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 CDY2AQ9Y6F7 541 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 CDY1Q9Y6F8 540 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 CD4P01730 458 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 NPEPPSP55786 919 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 CACNB2Q08289 660 aaPredicted RBP20.51■□□□□ 0.87
ABCA2-217ENST00000479446 DCAF4L1Q3SXM0 396 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 VPS33BQ9H267 617 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 CAPN6Q9Y6Q1 641 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 TRAPPC3O43617 180 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 PTK2BQ14289 1009 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 ACCSLQ4AC99 568 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 NEXMIFQ5QGS0 1516 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 MSH4O15457 936 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 SEC24DO94855 1032 aaPredicted RBP20.51■□□□□ 0.87
ABCA2-217ENST00000479446 PDGFRBP09619 1106 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 VEPH1Q14D04 833 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 SMIM5Q71RC9 77 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 USP33Q8TEY7 942 aa20.51■□□□□ 0.87
ABCA2-217ENST00000479446 LRRIQ3A6PVS8 624 aaPredicted RBP20.5■□□□□ 0.87
ABCA2-217ENST00000479446 RARBP10826 455 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 SMTNL2Q2TAL5 461 aa20.5■□□□□ 0.87
ABCA2-217ENST00000479446 SETD3Q86TU7 594 aaPredicted RBP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms