RNA–Protein interactions for RNA: ENST00000479199.1

GCA-208, Transcript of grancalcin, humanhuman

TSL 2

Gene GCA, Length 597 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCA-208ENST00000479199 AARSP49588 968 aaKnown RBP eCLIP13.06□□□□□ -0.32
GCA-208ENST00000479199 ARHGAP8P85298 464 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 PPP2R3AQ06190 1150 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 DUSP4Q13115 394 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 SRSF5Q13243 272 aaKnown RBP13.06□□□□□ -0.32
GCA-208ENST00000479199 PLD1Q13393 1074 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 DTHD1Q6ZMT9 781 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 Q6ZS52 159 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 YAF2Q8IY57 180 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 BICD1Q96G01 975 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 ZSCAN31Q96LW9 406 aaPredicted RBP13.06□□□□□ -0.32
GCA-208ENST00000479199 TMEM209Q96SK2 561 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 NTPCRQ9BSD7 190 aaKnown RBP13.06□□□□□ -0.32
GCA-208ENST00000479199 SH2B1Q9NRF2 756 aaPredicted RBP13.06□□□□□ -0.32
GCA-208ENST00000479199 RAB23Q9ULC3 237 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 MAFFQ9ULX9 164 aa13.06□□□□□ -0.32
GCA-208ENST00000479199 UBQLN1Q9UMX0 589 aaKnown RBP13.06□□□□□ -0.32
GCA-208ENST00000479199 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.06□□□□□ -0.32
GCA-208ENST00000479199 MTMR11A4FU01 709 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 OR6C75A6NL08 312 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 CHURC1-FNTBB4DL54 471 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 FAM189A1O60320 539 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 CLTAP09496 248 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 SDHBP21912 280 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 HOXC13P31276 330 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 FNTBP49356 437 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 CDR1P51861 262 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 SMTNP53814 917 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 EPHB3P54753 998 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 NRLP54845 237 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 SLC12A3P55017 1021 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 NCKAP1LP55160 1127 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 ATP2C1P98194 919 aaPredicted RBP13.05□□□□□ -0.32
GCA-208ENST00000479199 FCHO2Q0JRZ9 810 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 PPP2R5DQ14738 602 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 ZBTB6Q15916 424 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 ENOX2Q16206 610 aaKnown RBP13.05□□□□□ -0.32
GCA-208ENST00000479199 HYIQ5T013 277 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 LAIR1Q6GTX8 287 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 TXNDC11Q6PKC3 985 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 DSTYKQ6XUX3 929 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 MAMSTRQ6ZN01 415 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 USP37Q86T82 979 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 SYT2Q8N9I0 419 aaPredicted RBP13.05□□□□□ -0.32
GCA-208ENST00000479199 ATAD1Q8NBU5 361 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 TTC8Q8TAM2 541 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 CSGALNACT1Q8TDX6 532 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 ZFYVE19Q96K21 471 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 RTKNQ9BST9 563 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 MKNK1Q9BUB5 465 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 PLEKHA5Q9HAU0 1116 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 C2orf42Q9NWW7 574 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 SLC27A5Q9Y2P5 690 aa13.05□□□□□ -0.32
GCA-208ENST00000479199 VWA3AA6NCI4 1184 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 LACTBL1A8MY62 500 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 HNRNPDLO14979 420 aaKnown RBP13.04□□□□□ -0.32
GCA-208ENST00000479199 CHADO15335 359 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 PRAMEF12O95522 483 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 PLA2G4BP0C869 781 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 CTHP32929 405 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 CXCL12P48061 93 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 LIG4P49917 911 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
GCA-208ENST00000479199 GPR17Q13304 367 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 LRRC32Q14392 662 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 TMEM119Q4V9L6 283 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 HEATR6Q6AI08 1181 aaKnown RBP13.04□□□□□ -0.32
GCA-208ENST00000479199 MCTP1Q6DN14 999 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 OVOS1Q6IE37 1185 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 CENPPQ6IPU0 288 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 GAREM2Q75VX8 874 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 ARID3BQ8IVW6 561 aaPredicted RBP13.04□□□□□ -0.32
GCA-208ENST00000479199 SPEM1Q8N4L4 309 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 CELF5Q8N6W0 485 aaKnown RBP13.04□□□□□ -0.32
GCA-208ENST00000479199 OR10T2Q8NGX3 314 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 E2F7Q96AV8 911 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 LRRC3BQ96PB8 259 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 KIF2CQ99661 725 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 GPR88Q9GZN0 384 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 PPP4R2Q9NY27 417 aa13.04□□□□□ -0.32
GCA-208ENST00000479199 SPECC1L-ADORA2AF8WAN1 911 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 K7ENM7 598 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 K7ESF4 209 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 HRO43593 1189 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 NFICP08651 508 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 TYMPP19971 482 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 CYP3A5P20815 502 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 GABRR2P28476 465 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 ALDH1A3P47895 512 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 CYP4F8P98187 520 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 SIM2Q14190 667 aaPredicted RBP13.03□□□□□ -0.32
GCA-208ENST00000479199 MYBPC2Q14324 1141 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 ARSHQ5FYA8 562 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 GPR158Q5T848 1215 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 JADE1Q6IE81 842 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 HAUS6Q7Z4H7 955 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.03□□□□□ -0.32
GCA-208ENST00000479199 LRRC15Q8TF66 581 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 PSMG2Q969U7 264 aa13.03□□□□□ -0.32
GCA-208ENST00000479199 MSANTD3Q96H12 275 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms