RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ATF2P15336 505 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 TNNI1P19237 187 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 POLR2BP30876 1174 aaKnown RBP16.67■□□□□ 0.26
C9orf3-217ENST00000479161 ATICP31939 592 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 PSMC2P35998 433 aaKnown RBP16.67■□□□□ 0.26
C9orf3-217ENST00000479161 FKBP3Q00688 224 aaKnown RBP16.67■□□□□ 0.26
C9orf3-217ENST00000479161 SMARCB1Q12824 385 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 MYO1EQ12965 1108 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 ADAM9Q13443 819 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 CBX2Q14781 532 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-217ENST00000479161 CTXN3Q4LDR2 81 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 ATAT1Q5SQI0 421 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 RSPO2Q6UXX9 243 aaPredicted RBP16.67■□□□□ 0.26
C9orf3-217ENST00000479161 TRAPPC11Q7Z392 1133 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 ADHFE1Q8IWW8 467 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 TMEM86AQ8N2M4 240 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 OR5B17Q8NGF7 314 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 ADAMTS19Q8TE59 1207 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 MAN1C1Q9NR34 630 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 MAPK8IP1Q9UQF2 711 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 R3HCC1Q9Y3T6 440 aaKnown RBP16.67■□□□□ 0.26
C9orf3-217ENST00000479161 TSC2P49815 1807 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 PTPRJQ12913 1337 aa16.67■□□□□ 0.26
C9orf3-217ENST00000479161 C2orf16Q68DN1 1984 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 CYB561D2O14569 222 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 CETN3O15182 167 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 ADAM12O43184 909 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 ZMYND10O75800 440 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 DLATP10515 647 aaKnown RBP16.66■□□□□ 0.26
C9orf3-217ENST00000479161 IL9P15248 144 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 RPL17P18621 184 aaKnown RBP16.66■□□□□ 0.26
C9orf3-217ENST00000479161 CCNE1P24864 410 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 ROR1Q01973 937 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 OVOS1Q6IE37 1185 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 CCDC149Q6ZUS6 474 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 METTL23Q86XA0 190 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 PALB2Q86YC2 1186 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 TCEAL8Q8IYN2 117 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 TOP6BLQ8N6T0 577 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 NOC3LQ8WTT2 800 aaKnown RBP16.66■□□□□ 0.26
C9orf3-217ENST00000479161 CCDC127Q96BQ5 260 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 TSG101Q99816 390 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 PHF7Q9BWX1 381 aaPredicted RBP16.66■□□□□ 0.26
C9orf3-217ENST00000479161 AFF4Q9UHB7 1163 aaKnown RBP16.66■□□□□ 0.26
C9orf3-217ENST00000479161 USTQ9Y2C2 406 aa16.66■□□□□ 0.26
C9orf3-217ENST00000479161 DENND4AQ7Z401 1863 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 AKAP3O75969 853 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 C4BPAP04003 597 aaKnown RBP16.65■□□□□ 0.26
C9orf3-217ENST00000479161 BMP6P22004 513 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 GTF2H1P32780 548 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 CASP4P49662 377 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 GPR17Q13304 367 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 SMYD4Q8IYR2 804 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-217ENST00000479161 THEM5Q8N1Q8 247 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 ZNF516Q92618 1163 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 UHRF1Q96T88 793 aaPredicted RBP16.65■□□□□ 0.26
C9orf3-217ENST00000479161 PRKD2Q9BZL6 878 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 CLSTN2Q9H4D0 955 aa16.65■□□□□ 0.26
C9orf3-217ENST00000479161 CCDC195A0A1B0GUA6 201 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 BICDL2A1A5D9 508 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 WDR27A2RRH5 827 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 LRRIQ3A6PVS8 624 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-217ENST00000479161 PPP1R3GB7ZBB8 358 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 GABRDO14764 452 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 SLC16A3O15427 465 aaKnown RBP16.64■□□□□ 0.25
C9orf3-217ENST00000479161 HUS1O60921 280 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 LHX1P48742 406 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 VAMP7P51809 220 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 ZP2Q05996 745 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 BFSP1Q12934 665 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 ZACNQ401N2 412 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 LIN9Q5TKA1 542 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 CEP135Q66GS9 1140 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 FAM186BQ8IYM0 893 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 TMEM130Q8N3G9 435 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 PLEKHO2Q8TD55 490 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 C2orf15Q8WU43 125 aaKnown RBP16.64■□□□□ 0.25
C9orf3-217ENST00000479161 TAF4BQ92750 862 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 ERCC4Q92889 916 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-217ENST00000479161 SYAP1Q96A49 352 aaPredicted RBP16.64■□□□□ 0.25
C9orf3-217ENST00000479161 HPDLQ96IR7 371 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 FAXDC2Q96IV6 333 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 CEP63Q96MT8 703 aa16.64■□□□□ 0.25
C9orf3-217ENST00000479161 LOC730098B7Z3J9 87 aa16.63■□□□□ 0.25
C9orf3-217ENST00000479161 CST3P01034 146 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-217ENST00000479161 KRT19P08727 400 aa16.63■□□□□ 0.25
C9orf3-217ENST00000479161 KRT13P13646 458 aa16.63■□□□□ 0.25
C9orf3-217ENST00000479161 CLUL1Q15846 466 aa16.63■□□□□ 0.25
C9orf3-217ENST00000479161 RARS2Q5T160 578 aaKnown RBP16.63■□□□□ 0.25
C9orf3-217ENST00000479161 ANKRD40Q6AI12 368 aa16.63■□□□□ 0.25
C9orf3-217ENST00000479161 ZNF707Q96C28 371 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-217ENST00000479161 ACBD6Q9BR61 282 aa16.63■□□□□ 0.25
C9orf3-217ENST00000479161 XYLT2Q9H1B5 865 aa16.63■□□□□ 0.25
C9orf3-217ENST00000479161 AVENQ9NQS1 362 aaPredicted RBP16.63■□□□□ 0.25
C9orf3-217ENST00000479161 DOCK6Q96HP0 2047 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 DOCK8Q8NF50 2099 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 STX10O60499 249 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 XYLBO75191 536 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 TACC1O75410 805 aa16.62■□□□□ 0.25
C9orf3-217ENST00000479161 C8AP07357 584 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms