RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 SCN1AP35498 2009 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 LRRIQ3A6PVS8 624 aaPredicted RBP22.04■■□□□ 1.12
VARS-224ENST00000479051 IKBKBO14920 756 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 SLC16A3O15427 465 aaKnown RBP22.04■■□□□ 1.12
VARS-224ENST00000479051 ADAM12O43184 909 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 TBC1D4O60343 1298 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 HUS1O60921 280 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 SPATA31D3P0C874 917 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 CPB1P15086 417 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 CLDN10P78369 228 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 SPATA31D4Q6ZUB0 917 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 CXorf38Q8TB03 319 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 NELFBQ8WX92 580 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 HPDLQ96IR7 371 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 RIPOR3Q96MK2 946 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 S1PR5Q9H228 398 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 FBXW11Q9UKB1 542 aa22.04■■□□□ 1.12
VARS-224ENST00000479051 USP15Q9Y4E8 981 aaPredicted RBP22.04■■□□□ 1.12
VARS-224ENST00000479051 PPP1R3GB7ZBB8 358 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 CLSTN1O94985 981 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 CD44P16070 742 aaKnown RBP22.03■■□□□ 1.12
VARS-224ENST00000479051 BMP6P22004 513 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 ELF1P32519 619 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 ROR1Q01973 937 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 PAK1Q13153 545 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 SMAD2Q15796 467 aaKnown RBP22.03■■□□□ 1.12
VARS-224ENST00000479051 TPGS2Q68CL5 300 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 FOXR2Q6PJQ5 311 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 RSPO2Q6UXX9 243 aaPredicted RBP22.03■■□□□ 1.12
VARS-224ENST00000479051 CCDC149Q6ZUS6 474 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 RTL10Q7L3V2 364 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 TMEM86AQ8N2M4 240 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 C12orf76Q8N812 135 aaPredicted RBP22.03■■□□□ 1.12
VARS-224ENST00000479051 CMASQ8NFW8 434 aaPredicted RBP22.03■■□□□ 1.12
VARS-224ENST00000479051 ZNF461Q8TAF7 563 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 PLEKHO2Q8TD55 490 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 ZNF516Q92618 1163 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 BORCS6Q96GS4 357 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 NECTIN4Q96NY8 510 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 GZF1Q9H116 711 aaPredicted RBP22.03■■□□□ 1.12
VARS-224ENST00000479051 ZDHHC7Q9NXF8 308 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 GDAP2Q9NXN4 497 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 CTNND2Q9UQB3 1225 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 SNX9Q9Y5X1 595 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 PLXNA3P51805 1871 aa22.03■■□□□ 1.12
VARS-224ENST00000479051 TRIM49BA6NDI0 452 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 STX10O60499 249 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 IL9P15248 144 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 ATICP31939 592 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 MTHFRP42898 656 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 PMS1P54277 932 aaKnown RBP22.02■■□□□ 1.12
VARS-224ENST00000479051 ATAT1Q5SQI0 421 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 TMC5Q6UXY8 1006 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 CYP26C1Q6V0L0 522 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 C15orf39Q6ZRI6 1047 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 TOP6BLQ8N6T0 577 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 SPATA18Q8TC71 538 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 ADAMTS19Q8TE59 1207 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 SYAP1Q96A49 352 aaPredicted RBP22.02■■□□□ 1.12
VARS-224ENST00000479051 CEP63Q96MT8 703 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 MAFFQ9ULX9 164 aa22.02■■□□□ 1.12
VARS-224ENST00000479051 ZMYND10O75800 440 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 DLG4P78352 724 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 CBX2Q14781 532 aaPredicted RBP22.01■■□□□ 1.11
VARS-224ENST00000479051 UVSSAQ2YD98 709 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 PPM1LQ5SGD2 360 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 TDRD10Q5VZ19 366 aaKnown RBP22.01■■□□□ 1.11
VARS-224ENST00000479051 WSCD1Q658N2 575 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 DPH6Q7L8W6 267 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 ZC3H3Q8IXZ2 948 aaKnown RBP22.01■■□□□ 1.11
VARS-224ENST00000479051 MLKLQ8NB16 471 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 GPT2Q8TD30 523 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 SUSD6Q92537 303 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 EEF2KMTQ96G04 330 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 PRKAG3Q9UGI9 489 aa22.01■■□□□ 1.11
VARS-224ENST00000479051 CCDC195A0A1B0GUA6 201 aa22■■□□□ 1.11
VARS-224ENST00000479051 WDR27A2RRH5 827 aa22■■□□□ 1.11
VARS-224ENST00000479051 ABLIM3O94929 683 aa22■■□□□ 1.11
VARS-224ENST00000479051 FGFR1OPO95684 399 aaKnown RBP22■■□□□ 1.11
VARS-224ENST00000479051 STAU1O95793 577 aaKnown RBP22■■□□□ 1.11
VARS-224ENST00000479051 C4BPAP04003 597 aaKnown RBP22■■□□□ 1.11
VARS-224ENST00000479051 C8AP07357 584 aa22■■□□□ 1.11
VARS-224ENST00000479051 ATF2P15336 505 aa22■■□□□ 1.11
VARS-224ENST00000479051 TNNC1P63316 161 aa22■■□□□ 1.11
VARS-224ENST00000479051 NCOA4Q13772 614 aa22■■□□□ 1.11
VARS-224ENST00000479051 ZACNQ401N2 412 aa22■■□□□ 1.11
VARS-224ENST00000479051 GPR149Q86SP6 731 aa22■■□□□ 1.11
VARS-224ENST00000479051 PDCL2Q8N4E4 241 aa22■■□□□ 1.11
VARS-224ENST00000479051 MMS19Q96T76 1030 aa22■■□□□ 1.11
VARS-224ENST00000479051 PIDD1Q9HB75 910 aa22■■□□□ 1.11
VARS-224ENST00000479051 METTL14Q9HCE5 456 aaKnown RBP22■■□□□ 1.11
VARS-224ENST00000479051 AFF4Q9UHB7 1163 aaKnown RBP22■■□□□ 1.11
VARS-224ENST00000479051 DACH1Q9UI36 760 aa22■■□□□ 1.11
VARS-224ENST00000479051 MTCL1Q9Y4B5 1905 aaKnown RBP22■■□□□ 1.11
VARS-224ENST00000479051 PRRG1O14668 218 aa21.99■■□□□ 1.11
VARS-224ENST00000479051 CST3P01034 146 aaPredicted RBP21.99■■□□□ 1.11
VARS-224ENST00000479051 HNRNPA1P09651 372 aaKnown RBP eCLIP21.99■■□□□ 1.11
VARS-224ENST00000479051 TRIM49P0CI25 452 aa21.99■■□□□ 1.11
VARS-224ENST00000479051 TRIM49CP0CI26 452 aa21.99■■□□□ 1.11
VARS-224ENST00000479051 HOXA9P31269 272 aa21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms