RNA–Protein interactions for RNA: ENST00000478938.1

SDF4-206, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,591 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-206ENST00000478938 WDR46O15213 610 aaKnown RBP22.38■■□□□ 1.17
SDF4-206ENST00000478938 PLS3P13797 630 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 CASP4P49662 377 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 HDAC4P56524 1084 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 PTK6Q13882 451 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 TLR1Q15399 786 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 RHOT2Q8IXI1 618 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 GCNAQ96QF7 691 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 RIOK1Q9BRS2 568 aaKnown RBP22.38■■□□□ 1.17
SDF4-206ENST00000478938 ACP6Q9NPH0 428 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 TMEM260Q9NX78 707 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 SH3PXD2BA1X283 911 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 TSPY2A6NKD2 308 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 CA8P35219 290 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 STT3AP46977 705 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 EDRF1Q3B7T1 1238 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 HSP90AA5PQ58FG0 334 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 LMOD2Q6P5Q4 547 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 TMC7Q7Z402 723 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 ZNF276Q8N554 614 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 TSSK1BQ9BXA7 367 aa22.38■■□□□ 1.17
SDF4-206ENST00000478938 LIN28AQ9H9Z2 209 aaKnown RBP22.38■■□□□ 1.17
SDF4-206ENST00000478938 MTO1Q9Y2Z2 717 aaKnown RBP22.38■■□□□ 1.17
SDF4-206ENST00000478938 TTLL13PA6NNM8 815 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 H3BSA7 217 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 SPTLC1O15269 473 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 SORBS3O60504 671 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 TDP2O95551 362 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 KRT4P19013 534 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 MAGEA4P43358 317 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 TRIP10Q15642 601 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 SLCO2A1Q92959 643 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 GFM2Q969S9 779 aaKnown RBP22.37■■□□□ 1.17
SDF4-206ENST00000478938 SELENONQ9NZV5 590 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 SPOPO43791 374 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 ADAM23O75077 832 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 FKBP6O75344 327 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 CYP2D6P10635 497 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 MYL2P10916 166 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 FXR2P51116 673 aaKnown RBP eCLIP22.37■■□□□ 1.17
SDF4-206ENST00000478938 PFKPQ01813 784 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 RC3H1Q5TC82 1133 aaKnown RBP22.37■■□□□ 1.17
SDF4-206ENST00000478938 C3orf62Q6ZUJ4 267 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 PNMA1Q8ND90 353 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 SLC20A1Q8WUM9 679 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 SLC35C1Q96A29 364 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 PPP1R10Q96QC0 940 aaKnown RBP22.37■■□□□ 1.17
SDF4-206ENST00000478938 MAD2L2Q9UI95 211 aa22.37■■□□□ 1.17
SDF4-206ENST00000478938 HBS1LQ9Y450 684 aaKnown RBP22.37■■□□□ 1.17
SDF4-206ENST00000478938 SMCO2A6NFE2 343 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 CAMTA2O94983 1202 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 GOLGA8HP0CJ92 632 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 PMLP29590 882 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 THOC7Q6I9Y2 204 aaKnown RBP22.36■■□□□ 1.17
SDF4-206ENST00000478938 SFR1Q86XK3 245 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 PIP4K2CQ8TBX8 421 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 CD101Q93033 1021 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 RBM15Q96T37 977 aaKnown RBP eCLIP22.36■■□□□ 1.177e-7■□□□□ 10.2
SDF4-206ENST00000478938 MANSC1Q9H8J5 431 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 DNAJC12Q9UKB3 198 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 ARHGAP10A1A4S6 786 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 MEI4A8MW99 385 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 E9PMD0 336 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 DLDP09622 509 aaKnown RBP22.36■■□□□ 1.17
SDF4-206ENST00000478938 PLCB3Q01970 1234 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 ADRM1Q16186 407 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 ADGRG6Q86SQ4 1221 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 UIMC1Q96RL1 719 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 FAM118BQ9BPY3 351 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 SLC17A7Q9P2U7 560 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 ITGB1BP2Q9UKP3 347 aa22.36■■□□□ 1.17
SDF4-206ENST00000478938 FTLP02792 175 aaPredicted RBP22.35■■□□□ 1.17
SDF4-206ENST00000478938 HOXA7P31268 230 aaPredicted RBP22.35■■□□□ 1.17
SDF4-206ENST00000478938 SEPT7Q16181 437 aaKnown RBP22.35■■□□□ 1.17
SDF4-206ENST00000478938 GRAMD1BQ3KR37 738 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 MAP3K21Q5TCX8 1036 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 ZNF746Q6NUN9 644 aaPredicted RBP22.35■■□□□ 1.17
SDF4-206ENST00000478938 SLC26A7Q8TE54 656 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 JDP2Q8WYK2 163 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 SNX27Q96L92 541 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 GPR88Q9GZN0 384 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 WNT8AQ9H1J5 351 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 SAYSD1Q9NPB0 183 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 APPL1Q9UKG1 709 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 MEGF6O75095 1541 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 FAM237BA0A1B0GVD1 139 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 HSPA2P54652 639 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 C16orf72Q14CZ0 275 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 ZYXQ15942 572 aaKnown RBP22.35■■□□□ 1.17
SDF4-206ENST00000478938 ANKDD1AQ495B1 522 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 ARSHQ5FYA8 562 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 SAPCD2Q86UD0 394 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 PLEKHO2Q8TD55 490 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 TCHPQ9BT92 498 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 BMP2KQ9NSY1 1161 aaPredicted RBP22.35■■□□□ 1.17
SDF4-206ENST00000478938 TSC22D4Q9Y3Q8 395 aa22.35■■□□□ 1.17
SDF4-206ENST00000478938 CAPN8A6NHC0 703 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 LRRN2O75325 713 aa22.34■■□□□ 1.17
SDF4-206ENST00000478938 EEF2P13639 858 aaKnown RBP22.34■■□□□ 1.17
SDF4-206ENST00000478938 ENTPD1P49961 510 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms