RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 LRMPQ12912 555 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 MRPL58Q14197 206 aaKnown RBP17.06■□□□□ 0.32
COPS3-207ENST00000477299 KRT31Q15323 416 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 WDR72Q3MJ13 1102 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 KIAA1841Q6NSI8 718 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
COPS3-207ENST00000477299 APTXQ7Z2E3 356 aaKnown RBP17.06■□□□□ 0.32
COPS3-207ENST00000477299 LMO3Q8TAP4 145 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 PPM1EQ8WY54 764 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 ZNF560Q96MR9 790 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 KLHL5Q96PQ7 755 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 TMEM209Q96SK2 561 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 LPIN3Q9BQK8 851 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 CLSTN3Q9BQT9 956 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 TUBGCP2Q9BSJ2 902 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 NAT10Q9H0A0 1025 aaKnown RBP17.06■□□□□ 0.32
COPS3-207ENST00000477299 VPS16Q9H269 839 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 IGFLR1Q9H665 355 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 GDAP2Q9NXN4 497 aa17.06■□□□□ 0.32
COPS3-207ENST00000477299 CARNS1A5YM72 827 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 LINC01565O15544 149 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 AFPP02771 609 aaKnown RBP17.05■□□□□ 0.32
COPS3-207ENST00000477299 URODP06132 367 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 OR4Q2P0C623 313 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 FOSL2P15408 326 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 NRIP1P48552 1158 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 HYAL1Q12794 435 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 ELAVL2Q12926 359 aaKnown RBP17.05■□□□□ 0.32
COPS3-207ENST00000477299 SMC1AQ14683 1233 aaKnown RBP17.05■□□□□ 0.32
COPS3-207ENST00000477299 PSMD5Q16401 504 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 PTPROQ16827 1216 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 CCDC142Q17RM4 750 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 ZNF699Q32M78 642 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 SCARA5Q6ZMJ2 495 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 LIMS2Q7Z4I7 341 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 USP37Q86T82 979 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 PDCL2Q8N4E4 241 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 FBXL13Q8NEE6 735 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 VN1R2Q8NFZ6 395 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 FEZF2Q8TBJ5 459 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 KBTBD7Q8WVZ9 684 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 MRPL45Q9BRJ2 306 aaKnown RBP17.05■□□□□ 0.32
COPS3-207ENST00000477299 CRACR2AQ9BSW2 395 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 TSPY26PQ9H489 355 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 SMYD3Q9H7B4 428 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 NGRNQ9NPE2 291 aaKnown RBP17.05■□□□□ 0.32
COPS3-207ENST00000477299 MRPL17Q9NRX2 175 aaKnown RBP17.05■□□□□ 0.32
COPS3-207ENST00000477299 RAB20Q9NX57 234 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 COQ4Q9Y3A0 265 aa17.05■□□□□ 0.32
COPS3-207ENST00000477299 BRWD1Q9NSI6 2320 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 SYN3O14994 580 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 TEX28O15482 410 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 TBC1D4O60343 1298 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 STX10O60499 249 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 CLASP2O75122 1294 aaKnown RBP17.04■□□□□ 0.32
COPS3-207ENST00000477299 SPATA31D3P0C874 917 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 PRKCSHP14314 528 aaPredicted RBP17.04■□□□□ 0.32
COPS3-207ENST00000477299 SLC9A1P19634 815 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 LMO2P25791 158 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 OR1D2P34982 312 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 PNPLA4P41247 253 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 ZNF445P59923 1031 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 MYL7Q01449 175 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 MYO1EQ12965 1108 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 MAN2A1Q16706 1144 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 PTPN21Q16825 1174 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 SGSM1Q2NKQ1 1148 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 VWA3BQ502W6 1294 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 SPATA31D4Q6ZUB0 917 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 GAS2L3Q86XJ1 694 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 PALB2Q86YC2 1186 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 FAM114A1Q8IWE2 563 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 RNF214Q8ND24 703 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 MMS19Q96T76 1030 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 RXFP1Q9HBX9 757 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 LMCD1Q9NZU5 365 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 MAGEC2Q9UBF1 373 aaPredicted RBP17.04■□□□□ 0.32
COPS3-207ENST00000477299 FBXL5Q9UKA1 691 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 R3HCC1Q9Y3T6 440 aaKnown RBP17.04■□□□□ 0.32
COPS3-207ENST00000477299 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.04■□□□□ 0.32
COPS3-207ENST00000477299 IRAK3Q9Y616 596 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 CDY1Q9Y6F8 540 aa17.04■□□□□ 0.32
COPS3-207ENST00000477299 SMTNL1A8MU46 457 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 CLSTN1O94985 981 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 OAZ2O95190 189 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 STAU1O95793 577 aaKnown RBP17.03■□□□□ 0.32
COPS3-207ENST00000477299 CYP11A1P05108 521 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 WEE2P0C1S8 567 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 ODC1P11926 461 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 TYMPP19971 482 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 ACAT1P24752 427 aaKnown RBP17.03■□□□□ 0.32
COPS3-207ENST00000477299 EEF1GP26641 437 aaKnown RBP17.03■□□□□ 0.32
COPS3-207ENST00000477299 ATICP31939 592 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 COPB1P53618 953 aaKnown RBP17.03■□□□□ 0.32
COPS3-207ENST00000477299 ARPP19P56211 112 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 NOP14P78316 857 aaKnown RBP17.03■□□□□ 0.32
COPS3-207ENST00000477299 KCNMA1Q12791 1236 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 ZNF667Q5HYK9 610 aa17.03■□□□□ 0.32
COPS3-207ENST00000477299 OVOS1Q6IE37 1185 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms