RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 WDR27A2RRH5 827 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 KINO60870 393 aaKnown RBP14.48□□□□□ -0.09
ACTN4-205ENST00000477174 XYLBO75191 536 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 NR3C1P04150 777 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 POLR2BP30876 1174 aaKnown RBP14.48□□□□□ -0.09
ACTN4-205ENST00000477174 ARPP19P56211 112 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 NFIL3Q16649 462 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 OTOP3Q7RTS5 596 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 RNF135Q8IUD6 432 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 OR5B17Q8NGF7 314 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 SLC7A14Q8TBB6 771 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 CCDC127Q96BQ5 260 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 MTMR12Q9C0I1 747 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 GDAP2Q9NXN4 497 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 AFF4Q9UHB7 1163 aaKnown RBP14.48□□□□□ -0.09
ACTN4-205ENST00000477174 PCDHA5Q9Y5H7 936 aa14.48□□□□□ -0.09
ACTN4-205ENST00000477174 PRRG1O14668 218 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 GADD45BO75293 160 aaPredicted RBP14.47□□□□□ -0.09
ACTN4-205ENST00000477174 KRT19P08727 400 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 DLATP10515 647 aaKnown RBP14.47□□□□□ -0.09
ACTN4-205ENST00000477174 TNNI1P19237 187 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 RPL13P26373 211 aaKnown RBP14.47□□□□□ -0.09
ACTN4-205ENST00000477174 AP3M2P53677 418 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 CLDN10P78369 228 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 MYO1EQ12965 1108 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 GPR17Q13304 367 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 ZNF658Q5TYW1 1059 aaPredicted RBP14.47□□□□□ -0.09
ACTN4-205ENST00000477174 TRAPPC11Q7Z392 1133 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 ZDHHC14Q8IZN3 488 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 THEM5Q8N1Q8 247 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 FEZF2Q8TBJ5 459 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 SMARCE1Q969G3 411 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 ACSF2Q96CM8 615 aaPredicted RBP14.47□□□□□ -0.09
ACTN4-205ENST00000477174 TSHZ2Q9NRE2 1034 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.47□□□□□ -0.09
ACTN4-205ENST00000477174 SIX4Q9UIU6 781 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 MAPK8IP1Q9UQF2 711 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 FRMD4BQ9Y2L6 1034 aa14.47□□□□□ -0.09
ACTN4-205ENST00000477174 MAPK13O15264 365 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 DCXO43602 365 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 HUS1O60921 280 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 CPB1P15086 417 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 UBE2HP62256 183 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 SMARCB1Q12824 385 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 COBLL1Q53SF7 1204 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 WSCD1Q658N2 575 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 LMBRD2Q68DH5 695 aaPredicted RBP14.46□□□□□ -0.09
ACTN4-205ENST00000477174 RNF19BQ6ZMZ0 732 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 DPH6Q7L8W6 267 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 TMEM86AQ8N2M4 240 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 TDRD5Q8NAT2 981 aaKnown RBP14.46□□□□□ -0.09
ACTN4-205ENST00000477174 SPATA18Q8TC71 538 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 PARD3BQ8TEW8 1205 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 KHSRPQ92945 711 aaKnown RBP eCLIP14.46□□□□□ -0.09
ACTN4-205ENST00000477174 HPDLQ96IR7 371 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 CGRRF1Q99675 332 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 C1QTNF1Q9BXJ1 281 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 CYP4F11Q9HBI6 524 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 VWA8A3KMH1 1905 aa14.46□□□□□ -0.09
ACTN4-205ENST00000477174 PTPRJQ12913 1337 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 C2CD4DB7Z1M9 353 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 IKBKBO14920 756 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 SEC24AO95486 1093 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 ADCY1Q08828 1119 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 PDCD11Q14690 1871 aaKnown RBP14.45□□□□□ -0.1
ACTN4-205ENST00000477174 EDRF1Q3B7T1 1238 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 SCARA3Q6AZY7 606 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 CLEC17AQ6ZS10 378 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 TOP6BLQ8N6T0 577 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 TMC2Q8TDI7 906 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 ZNF516Q92618 1163 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 GZF1Q9H116 711 aaPredicted RBP14.45□□□□□ -0.1
ACTN4-205ENST00000477174 EPHX3Q9H6B9 360 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 HSFX1Q9UBD0 423 aa14.45□□□□□ -0.1
ACTN4-205ENST00000477174 CLUHO75153 1309 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 CCL16O15467 120 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 CST3P01034 146 aaPredicted RBP14.44□□□□□ -0.1
ACTN4-205ENST00000477174 LRG1P02750 347 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 FAM163BP0C2L3 166 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 PTPN2P17706 415 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 SP100P23497 879 aaPredicted RBP14.44□□□□□ -0.1
ACTN4-205ENST00000477174 NR2F2P24468 414 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 PRCPP42785 496 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 ENPEPQ07075 957 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 BFSP1Q12934 665 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 ADAM9Q13443 819 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 ZCWPW2Q504Y3 356 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 CEP135Q66GS9 1140 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 CENPPQ6IPU0 288 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 LIMS2Q7Z4I7 341 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 GRASPQ7Z6J2 395 aaPredicted RBP14.44□□□□□ -0.1
ACTN4-205ENST00000477174 PDCL2Q8N4E4 241 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 FAM84AQ96KN4 292 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 RTP3Q9BQQ7 232 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 ACBD6Q9BR61 282 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 ZCWPW1Q9H0M4 648 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 LIMD1Q9UGP4 676 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 POLIQ9UNA4 740 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 INSL5Q9Y5Q6 135 aa14.44□□□□□ -0.1
ACTN4-205ENST00000477174 SNX9Q9Y5X1 595 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms