RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 BTBD18B2RXH4 712 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 OAZ2O95190 189 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 C1QTNF9P0C862 333 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 HOXB3P14651 431 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-213ENST00000476777 CPB1P15086 417 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 RPA1P27694 616 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 PXNP49023 591 aaPredicted RBP12.43□□□□□ -0.42
BRCA1-213ENST00000476777 ZNF568Q3ZCX4 644 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 ARHGAP29Q52LW3 1261 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 PSAPL1Q6NUJ1 521 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 UNQ6494/PRO21346Q6UXR6 183 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 GAREM2Q75VX8 874 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 KIFAP3Q92845 792 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 ZC3H10Q96K80 434 aaKnown RBP12.43□□□□□ -0.42
BRCA1-213ENST00000476777 ACAP3Q96P50 834 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 OBP2AQ9NY56 170 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 ZMIZ1Q9ULJ6 1067 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 PCDHB8Q9UN66 801 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 PCDHGA5Q9Y5G8 931 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 EML5Q05BV3 1969 aa12.43□□□□□ -0.42
BRCA1-213ENST00000476777 KIF26AQ9ULI4 1882 aaPredicted RBP12.42□□□□□ -0.42
BRCA1-213ENST00000476777 LAMA5O15230 3695 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 DPYSL4O14531 572 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 ABLIM1O14639 778 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 EPB41L2O43491 1005 aaKnown RBP12.42□□□□□ -0.42
BRCA1-213ENST00000476777 OR4Q2P0C623 313 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 MCF2P10911 925 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 PROZP22891 400 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 MPLP40238 635 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 EPHB3P54753 998 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 TNK2Q07912 1038 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 DUSP4Q13115 394 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 PLD1Q13393 1074 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 RNF43Q68DV7 783 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 TCEAL6Q6IPX3 200 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 TAS1R3Q7RTX0 852 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 HAUS6Q7Z4H7 955 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 KDF1Q8NAX2 398 aaPredicted RBP12.42□□□□□ -0.42
BRCA1-213ENST00000476777 TCEAL3Q969E4 200 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 PGLYRP2Q96PD5 576 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 TARS2Q9BW92 718 aaKnown RBP12.42□□□□□ -0.42
BRCA1-213ENST00000476777 VPS45Q9NRW7 570 aa12.42□□□□□ -0.42
BRCA1-213ENST00000476777 GCN1Q92616 2671 aaKnown RBP12.42□□□□□ -0.42
BRCA1-213ENST00000476777 PHLPP2Q6ZVD8 1323 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 M0QZQ0 153 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 AKAP3O75969 853 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 PRAMEF12O95522 483 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 CCDC192P0DO97 292 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 MARCKSP29966 332 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-213ENST00000476777 WEE1P30291 646 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 MCM7P33993 719 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 NPTX2P47972 431 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 PLCB2Q00722 1185 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 YWHAHQ04917 246 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-213ENST00000476777 GPR17Q13304 367 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 ECM1Q16610 540 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 PLK5Q496M5 336 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 DNAJB7Q7Z6W7 309 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-213ENST00000476777 DIS3L2Q8IYB7 885 aaKnown RBP12.41□□□□□ -0.42
BRCA1-213ENST00000476777 TMEM130Q8N3G9 435 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 ERMNQ8TAM6 284 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 NUP210Q8TEM1 1887 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-213ENST00000476777 TMEM209Q96SK2 561 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 TMEM121BQ9BXQ6 578 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-213ENST00000476777 MRPL4Q9BYD3 311 aaKnown RBP12.41□□□□□ -0.42
BRCA1-213ENST00000476777 BHMT2Q9H2M3 363 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 ATXN3LQ9H3M9 355 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 TMEM134Q9H6X4 195 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 ARHGAP28Q9P2N2 729 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 WASF3Q9UPY6 502 aa12.41□□□□□ -0.42
BRCA1-213ENST00000476777 TIMM13Q9Y5L4 95 aaPredicted RBP12.41□□□□□ -0.42
BRCA1-213ENST00000476777 ACACAQ13085 2346 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 LOC400499M0QZD8 3231 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 IGSF10Q6WRI0 2623 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 CCDC169A6NNP5 214 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 GIPC1O14908 333 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 MUTP22033 750 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 ALDH1A3P47895 512 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 NOVA1P51513 510 aaKnown RBP12.4□□□□□ -0.42
BRCA1-213ENST00000476777 SLC10A6Q3KNW5 377 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 ITPRIPL2Q3MIP1 535 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 TMEM196Q5HYL7 178 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 GPR158Q5T848 1215 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 CENPPQ6IPU0 288 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 FSTL4Q6MZW2 842 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 MPZL3Q6UWV2 235 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 ATAD1Q8NBU5 361 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 BPIFB1Q8TDL5 484 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 PSMG2Q969U7 264 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 TCHPQ9BT92 498 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 OXCT2Q9BYC2 517 aaPredicted RBP12.4□□□□□ -0.42
BRCA1-213ENST00000476777 TUBGCP4Q9UGJ1 667 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 SLC8A2Q9UPR5 921 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 SLC27A5Q9Y2P5 690 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 ASB3Q9Y575 518 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 NUP205Q92621 2012 aa12.4□□□□□ -0.42
BRCA1-213ENST00000476777 HELZ2Q9BYK8 2649 aaKnown RBP12.4□□□□□ -0.43
BRCA1-213ENST00000476777 OR6C75A6NL08 312 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 C4orf47A7E2U8 309 aa12.39□□□□□ -0.43
BRCA1-213ENST00000476777 ATG13O75143 517 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms