RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 NETO1Q8TDF5 533 aa8.79□□□□□ -1
CHD6-207ENST00000476641 POF1BQ8WVV4 589 aa8.79□□□□□ -1
CHD6-207ENST00000476641 TCF12Q99081 682 aa8.79□□□□□ -1
CHD6-207ENST00000476641 NAP1L4Q99733 375 aaKnown RBP8.79□□□□□ -1
CHD6-207ENST00000476641 NSUN3Q9H649 340 aaKnown RBP8.79□□□□□ -1
CHD6-207ENST00000476641 CD320Q9NPF0 282 aa8.79□□□□□ -1
CHD6-207ENST00000476641 TMEM161AQ9NX61 479 aa8.79□□□□□ -1
CHD6-207ENST00000476641 PIN4Q9Y237 131 aaKnown RBP8.79□□□□□ -1
CHD6-207ENST00000476641 PCDHB6Q9Y5E3 794 aa8.79□□□□□ -1
CHD6-207ENST00000476641 COL4A3BPQ9Y5P4 624 aa8.79□□□□□ -1
CHD6-207ENST00000476641 WDR81Q562E7 1941 aa8.79□□□□□ -1
CHD6-207ENST00000476641 PP2D1A8MPX8 630 aa8.78□□□□□ -1
CHD6-207ENST00000476641 NT5C1B-RDH14C9J2C7 533 aa8.78□□□□□ -1
CHD6-207ENST00000476641 PER2O15055 1255 aa8.78□□□□□ -1
CHD6-207ENST00000476641 B4GALT5O43286 388 aa8.78□□□□□ -1
CHD6-207ENST00000476641 FZD6O60353 706 aa8.78□□□□□ -1
CHD6-207ENST00000476641 EIF5BO60841 1220 aaKnown RBP8.78□□□□□ -1
CHD6-207ENST00000476641 TBX10O75333 385 aa8.78□□□□□ -1
CHD6-207ENST00000476641 RB1P06400 928 aa8.78□□□□□ -1
CHD6-207ENST00000476641 RNASE1P07998 156 aaKnown RBP8.78□□□□□ -1
CHD6-207ENST00000476641 OR52Z1P0C646 297 aa8.78□□□□□ -1
CHD6-207ENST00000476641 ZSCAN20P17040 1043 aaPredicted RBP8.78□□□□□ -1
CHD6-207ENST00000476641 NPR3P17342 541 aa8.78□□□□□ -1
CHD6-207ENST00000476641 GLRA2P23416 452 aa8.78□□□□□ -1
CHD6-207ENST00000476641 HOXA11P31270 313 aaPredicted RBP8.78□□□□□ -1
CHD6-207ENST00000476641 LTBRP36941 435 aa8.78□□□□□ -1
CHD6-207ENST00000476641 RARRES1P49788 294 aa8.78□□□□□ -1
CHD6-207ENST00000476641 DNM2P50570 870 aa8.78□□□□□ -1
CHD6-207ENST00000476641 ERVFC1P60507 584 aa8.78□□□□□ -1
CHD6-207ENST00000476641 HMGN5P82970 282 aaKnown RBP8.78□□□□□ -1
CHD6-207ENST00000476641 CAPSQ13938 189 aa8.78□□□□□ -1
CHD6-207ENST00000476641 IL17AQ16552 155 aa8.78□□□□□ -1
CHD6-207ENST00000476641 UBXN11Q5T124 520 aa8.78□□□□□ -1
CHD6-207ENST00000476641 TWF2Q6IBS0 349 aaKnown RBP8.78□□□□□ -1
CHD6-207ENST00000476641 CATSPER4Q7RTX7 472 aa8.78□□□□□ -1
CHD6-207ENST00000476641 RBM23Q86U06 439 aaKnown RBP8.78□□□□□ -1
CHD6-207ENST00000476641 FERMT3Q86UX7 667 aa8.78□□□□□ -1
CHD6-207ENST00000476641 ZNF410Q86VK4 478 aa8.78□□□□□ -1
CHD6-207ENST00000476641 TMEM173Q86WV6 379 aaPredicted RBP8.78□□□□□ -1
CHD6-207ENST00000476641 CDR2LQ86X02 465 aaPredicted RBP8.78□□□□□ -1
CHD6-207ENST00000476641 CATSPER3Q86XQ3 398 aa8.78□□□□□ -1
CHD6-207ENST00000476641 C4orf32Q8N8J7 132 aa8.78□□□□□ -1
CHD6-207ENST00000476641 RNF149Q8NC42 400 aa8.78□□□□□ -1
CHD6-207ENST00000476641 PSPC1Q8WXF1 523 aaKnown RBP8.78□□□□□ -1
CHD6-207ENST00000476641 TMEM117Q9H0C3 514 aa8.78□□□□□ -1
CHD6-207ENST00000476641 FOXP1Q9H334 677 aaPredicted RBP8.78□□□□□ -1
CHD6-207ENST00000476641 MBNL3Q9NUK0 354 aaKnown RBP8.78□□□□□ -1
CHD6-207ENST00000476641 CLDND1Q9NY35 253 aa8.78□□□□□ -1
CHD6-207ENST00000476641 ADAMTS6Q9UKP5 1117 aa8.78□□□□□ -1
CHD6-207ENST00000476641 COG5Q9UP83 839 aa8.78□□□□□ -1
CHD6-207ENST00000476641 INPP5FQ9Y2H2 1132 aa8.78□□□□□ -1
CHD6-207ENST00000476641 A0A0U1RQF3 1178 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 FGF18O76093 207 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 FAM13AO94988 1023 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 LYPLA2O95372 231 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 SFPQP23246 707 aaKnown RBP eCLIP8.77□□□□□ -1.01
CHD6-207ENST00000476641 GJB2P29033 226 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 CDC25AP30304 524 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 CDK5R2Q13319 367 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 GNL2Q13823 731 aaKnown RBP8.77□□□□□ -1.01
CHD6-207ENST00000476641 LEXMQ3ZCV2 418 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 ODR4Q5SWX8 454 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 PLPP4Q5VZY2 271 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 THNSL1Q8IYQ7 743 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 VN1R2Q8NFZ6 395 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 NEK9Q8TD19 979 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 CPB2Q96IY4 423 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 EIF2AQ9BY44 585 aaKnown RBP8.77□□□□□ -1.01
CHD6-207ENST00000476641 POLR3FQ9H1D9 316 aaPredicted RBP8.77□□□□□ -1.01
CHD6-207ENST00000476641 ELAC1Q9H777 363 aaKnown RBP8.77□□□□□ -1.01
CHD6-207ENST00000476641 AGPAT5Q9NUQ2 364 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 RWDD3Q9Y3V2 267 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 HES2Q9Y543 173 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 ATG2AQ2TAZ0 1938 aa8.77□□□□□ -1.01
CHD6-207ENST00000476641 KIAA1671Q9BY89 1806 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 HIDE1A8MVS5 230 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 TSPAN1O60635 241 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 DKC1O60832 514 aaKnown RBP eCLIP8.76□□□□□ -1.01
CHD6-207ENST00000476641 GLP2RO95838 553 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 B3GALT4O96024 378 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 EDN1P05305 212 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 FAM87AP0C7U9 286 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 U2AF2P26368 475 aaKnown RBP eCLIP8.76□□□□□ -1.012e-12■■□□□ 11.5
CHD6-207ENST00000476641 ARL2P36404 184 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 CD96P40200 585 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 NRIP1P48552 1158 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 MBTD1Q05BQ5 628 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 AAK1Q2M2I8 961 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 KCNT2Q6UVM3 1135 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 AGMOQ6ZNB7 445 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 OTUD6AQ7L8S5 288 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 ZNF280BQ86YH2 543 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 GALNT12Q8IXK2 581 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 GJD3Q8N144 294 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 LRRC43Q8N309 656 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 FEZF2Q8TBJ5 459 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 AUTS2Q8WXX7 1259 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 P2RX5Q93086 422 aa8.76□□□□□ -1.01
CHD6-207ENST00000476641 PABPC5Q96DU9 382 aaKnown RBP8.76□□□□□ -1.01
CHD6-207ENST00000476641 KIFC3Q9BVG8 833 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms