RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 AMHR2Q16671 573 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 ZACNQ401N2 412 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 SFMBT2Q5VUG0 894 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 SLC39A4Q6P5W5 647 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 SV2AQ7L0J3 742 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 CBWD2Q8IUF1 395 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 TC2NQ8N9U0 490 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 CPLX3Q8WVH0 158 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 PPP2R3CQ969Q6 453 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 ZBTB45Q96K62 511 aaPredicted RBP7.55□□□□□ -1.2
SHQ1-207ENST00000475558 CCDC42Q96M95 316 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 NT5C1BQ96P26 610 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 CGRRF1Q99675 332 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 PDZD7Q9H5P4 517 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 C1orf112Q9NSG2 853 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 INTS13Q9NVM9 706 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 KANSL3Q9P2N6 904 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 ANKFY1Q9P2R3 1169 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 APEX2Q9UBZ4 518 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 MUTYHQ9UIF7 546 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 CD207Q9UJ71 328 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 GINS2Q9Y248 185 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 CDY2AQ9Y6F7 541 aa7.55□□□□□ -1.2
SHQ1-207ENST00000475558 ZDBF2Q9HCK1 2354 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 PTPRZ1P23471 2315 aaPredicted RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 ARHGEF37A1IGU5 675 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 GOLGA8IPA6NC78 632 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 TMEM221A6NGB7 291 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 GOLGA8JA6NMD2 632 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 ESPNB1AK53 854 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 M0R296 226 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 ABLIM1O14639 778 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 GRM6O15303 877 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 MFAP3LO75121 409 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 KIF4AO95239 1232 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 STAU1O95793 577 aaKnown RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 GYPCP04921 128 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 CTSHP09668 335 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 TMEM191BP0C7N4 346 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 PNPLA4P41247 253 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 GCLMP48507 274 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 ADKP55263 362 aaKnown RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 POLR2FP61218 127 aaKnown RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 DLX2Q07687 328 aaPredicted RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 MYO1EQ12965 1108 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 ADAM15Q13444 863 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 CLUL1Q15846 466 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 MEA1Q16626 185 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 TRIM65Q6PJ69 517 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 CRELD2Q6UXH1 353 aaPredicted RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 RUFY4Q6ZNE9 571 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 C15orf39Q6ZRI6 1047 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 TRIM67Q6ZTA4 783 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 RRAGAQ7L523 313 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 MRPL10Q7Z7H8 261 aaKnown RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 ZBTB33Q86T24 672 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 SUGP1Q8IWZ8 645 aaKnown RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 THNSL1Q8IYQ7 743 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 BEST2Q8NFU1 509 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 CLP1Q92989 425 aaKnown RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 PBXIP1Q96AQ6 731 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 SAAL1Q96ER3 474 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 OSMRQ99650 979 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 LSM14BQ9BX40 385 aaKnown RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 PLVAPQ9BX97 442 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 TTYH3Q9C0H2 523 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 TMEM117Q9H0C3 514 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 IRF2BPLQ9H1B7 796 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 CDT1Q9H211 546 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 IGFLR1Q9H665 355 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 MINDY3Q9H8M7 445 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 VRTNQ9H8Y1 702 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 CYP3A43Q9HB55 503 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 FAM207AQ9NSI2 230 aaPredicted RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 ABHD10Q9NUJ1 306 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 GCNT4Q9P109 453 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 ITGA11Q9UKX5 1188 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 KIAA1257Q9ULG3 409 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 ST3GAL5Q9UNP4 418 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 GIT1Q9Y2X7 761 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 EPN1Q9Y6I3 576 aaPredicted RBP7.54□□□□□ -1.2
SHQ1-207ENST00000475558 TRIOO75962 3097 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 LOXHD1Q8IVV2 1947 aa7.54□□□□□ -1.2
SHQ1-207ENST00000475558 CACNA1HO95180 2353 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 TTC3P53804 2025 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 A0A0U1RQF3 1178 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 LRRIQ3A6PVS8 624 aaPredicted RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 ENPP3O14638 875 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 MAP3K7O43318 606 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 HOXA2O43364 376 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 TBX10O75333 385 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 CHRNA1P02708 482 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 CCDC175P0C221 793 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 ITGA4P13612 1032 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 KCNE1P15382 129 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 SLC9A1P19634 815 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 RPL9P32969 192 aaKnown RBP7.53□□□□□ -1.2
SHQ1-207ENST00000475558 PRKCIP41743 596 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 NDUFV1P49821 464 aa7.53□□□□□ -1.2
SHQ1-207ENST00000475558 PPP3CAQ08209 521 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms