RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ATG13O75143 517 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 ZNF806P0C7X5 589 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 CYP3A5P20815 502 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 PAX3P23760 479 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 SOX9P48436 509 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 SMTNP53814 917 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 SHC2P98077 582 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 DUSP4Q13115 394 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 GNL2Q13823 731 aaKnown RBP13.72□□□□□ -0.21
SKA3-206ENST00000475251 CCINQ13939 588 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 MYBPC2Q14324 1141 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 PON2Q15165 354 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 TTC38Q5R3I4 469 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 CACNA2D4Q7Z3S7 1137 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 TMC8Q8IU68 726 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 BPIFB1Q8TDL5 484 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 SNX29Q8TEQ0 813 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 GAB3Q8WWW8 586 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 PSMG2Q969U7 264 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 PGLYRP2Q96PD5 576 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 GCNAQ96QF7 691 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 TSPAN18Q96SJ8 248 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 LRRC3Q9BY71 257 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 ATXN3LQ9H3M9 355 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 HSFX1Q9UBD0 423 aa13.72□□□□□ -0.21
SKA3-206ENST00000475251 UBQLN1Q9UMX0 589 aaKnown RBP13.72□□□□□ -0.21
SKA3-206ENST00000475251 GREB1Q4ZG55 1949 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 ABLIM1O14639 778 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 CLDN3O15551 220 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 JAK2O60674 1132 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 RPP40O75818 363 aaKnown RBP13.71□□□□□ -0.21
SKA3-206ENST00000475251 AKAP3O75969 853 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 EPN2O95208 641 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 CCDC192P0DO97 292 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 PMLP29590 882 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 WEE1P30291 646 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 LRPAP1P30533 357 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 AMPD2Q01433 879 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 VEPH1Q14D04 833 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 ECM1Q16610 540 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 KYAT1Q16773 422 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 SLC10A6Q3KNW5 377 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 GPR158Q5T848 1215 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 KRT79Q5XKE5 535 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 ARMCX5Q6P1M9 558 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 TXNDC11Q6PKC3 985 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 ZPBP2Q6X784 338 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 DSTYKQ6XUX3 929 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 TAS1R3Q7RTX0 852 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 RSPRY1Q96DX4 576 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 C8orf76Q96K31 380 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 NTPCRQ9BSD7 190 aaKnown RBP13.71□□□□□ -0.21
SKA3-206ENST00000475251 DNAJC25Q9H1X3 360 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 ARRDC1-AS1Q9H2J1 176 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 GTSE1Q9NYZ3 720 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 TUBGCP4Q9UGJ1 667 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 PCDHGA5Q9Y5G8 931 aa13.71□□□□□ -0.21
SKA3-206ENST00000475251 NUP210Q8TEM1 1887 aaPredicted RBP13.71□□□□□ -0.21
SKA3-206ENST00000475251 H0YCG3 227 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 AXIN1O15169 862 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 SLC16A4O15374 487 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 LARGE1O95461 756 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 TYMPP19971 482 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 GABRR2P28476 465 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 CDC25CP30307 473 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 MATR3P43243 847 aaKnown RBP eCLIP13.7□□□□□ -0.22
SKA3-206ENST00000475251 AARSP49588 968 aaKnown RBP eCLIP13.7□□□□□ -0.22
SKA3-206ENST00000475251 MCM2P49736 904 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 CLCN6P51797 869 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 PPP2R3AQ06190 1150 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 ITPRIPL2Q3MIP1 535 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 N4BP2L1Q5TBK1 243 aaPredicted RBP13.7□□□□□ -0.22
SKA3-206ENST00000475251 OVOS1Q6IE37 1185 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 CENPPQ6IPU0 288 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 DNAJB7Q7Z6W7 309 aaPredicted RBP13.7□□□□□ -0.22
SKA3-206ENST00000475251 DAW1Q8N136 415 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 SPIRE2Q8WWL2 714 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 EXOC4Q96A65 974 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 KIF12Q96FN5 646 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 TASP1Q9H6P5 420 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 SLC8A2Q9UPR5 921 aa13.7□□□□□ -0.22
SKA3-206ENST00000475251 MTMR11A4FU01 709 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 E9PMD0 336 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 LAD1O00515 517 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 EIF5BO60841 1220 aaKnown RBP13.69□□□□□ -0.22
SKA3-206ENST00000475251 CLTAP09496 248 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 OR4Q2P0C623 313 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 CXCL8P10145 99 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 ODC1P11926 461 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 GUCY2CP25092 1073 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 RAP1GAPP47736 663 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 TUFMP49411 452 aaKnown RBP13.69□□□□□ -0.22
SKA3-206ENST00000475251 GUCY1B3Q02153 619 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 MCL1Q07820 350 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 GRSF1Q12849 480 aaKnown RBP eCLIP13.69□□□□□ -0.22
SKA3-206ENST00000475251 SF3A2Q15428 464 aaKnown RBP13.69□□□□□ -0.22
SKA3-206ENST00000475251 TAF12Q16514 161 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 STXBP5Q5T5C0 1151 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 STPG1Q5TH74 334 aa13.69□□□□□ -0.22
SKA3-206ENST00000475251 RINT1Q6NUQ1 792 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms