RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CD4P01730 458 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 ITGB3P05106 788 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 RSPH10BP0C881 870 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 EPB42P16452 691 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 WASHC5Q12768 1159 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 LAYNQ6UX15 382 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 SMAD5Q99717 465 aaKnown RBP11.47□□□□□ -0.57
VAPB-204ENST00000475243 WWP1Q9H0M0 922 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 MYOZ2Q9NPC6 264 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 ADCY3O60266 1144 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 FKBP9O95302 570 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 BTKQ06187 659 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 FKBP9P1Q75LS8 142 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 SPATA21Q7Z572 469 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 GALNT4Q8N4A0 578 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 BRD8Q9H0E9 1235 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 TNS3Q68CZ2 1445 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 SRGNP10124 158 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 SOAT1P35610 550 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 CENPAP49450 140 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 GLB1LQ6UWU2 654 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 ZC4H2Q9NQZ6 224 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 PNMA8BQ9ULN7 279 aaPredicted RBP11.47□□□□□ -0.57
VAPB-204ENST00000475243 ALKQ9UM73 1620 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 CCL15-CCL14A0A0B4J2E2 113 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 SLC16A3O15427 465 aaKnown RBP11.47□□□□□ -0.57
VAPB-204ENST00000475243 CYP2C9P11712 490 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 COMTP21964 271 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 PLIN5Q00G26 463 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 CCL15Q16663 113 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 NBPF9Q3BBW0 867 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 C16orf86Q6ZW13 317 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 RIN2Q8WYP3 895 aaPredicted RBP11.47□□□□□ -0.57
VAPB-204ENST00000475243 TARS2Q9BW92 718 aaKnown RBP11.47□□□□□ -0.57
VAPB-204ENST00000475243 MOV10L1Q9BXT6 1211 aaKnown RBP11.47□□□□□ -0.57
VAPB-204ENST00000475243 ZFYVE28Q9HCC9 887 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 HACL1Q9UJ83 578 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 ARHGEF40Q8TER5 1519 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 PHF20L1A8MW92 1017 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 CHRM3P20309 590 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 NPEPPSP55786 919 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 PTK7Q13308 1070 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 DGKDQ16760 1214 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 CCDC157Q569K6 752 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 LONP2Q86WA8 852 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 C17orf80Q9BSJ5 609 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 TIPINQ9BVW5 301 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 LRRC7Q96NW7 1537 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 CYP2C19P33261 490 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 HARS2P49590 506 aaKnown RBP11.47□□□□□ -0.57
VAPB-204ENST00000475243 SV2CQ496J9 727 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 SHCBP1LQ9BZQ2 653 aa11.47□□□□□ -0.57
VAPB-204ENST00000475243 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
VAPB-204ENST00000475243 C19orf81C9J6K1 198 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 AVPR1AP37288 418 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 FAM71DQ8N9W8 422 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 ZNF555Q8NEP9 628 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 CACNA2D2Q9NY47 1150 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 C6orf203Q9P0P8 240 aaPredicted RBP11.46□□□□□ -0.57
VAPB-204ENST00000475243 ZNF263O14978 683 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 HSPA1AP0DMV8 641 aaKnown RBP11.46□□□□□ -0.57
VAPB-204ENST00000475243 HSPA1BP0DMV9 641 aaKnown RBP11.46□□□□□ -0.57
VAPB-204ENST00000475243 HDAC4P56524 1084 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 MROH9Q5TGP6 573 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 MXRA8Q9BRK3 442 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 ERAP1Q9NZ08 941 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 ZNF229Q9UJW7 825 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 PMPCBO75439 489 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 GRAMD1AQ96CP6 724 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 IL17RAQ96F46 866 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 OSBPL8Q9BZF1 889 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 VCPKMTQ9H867 229 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 SPON1Q9HCB6 807 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 RBM12Q9NTZ6 932 aaKnown RBP11.46□□□□□ -0.57
VAPB-204ENST00000475243 ABCC3O15438 1527 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 PSMD3O43242 534 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 CST8O60676 142 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 YY1P25490 414 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 ABCE1P61221 599 aaKnown RBP11.46□□□□□ -0.57
VAPB-204ENST00000475243 NR1I3Q14994 352 aa11.46□□□□□ -0.57
VAPB-204ENST00000475243 DDX42Q86XP3 938 aaKnown RBP eCLIP11.46□□□□□ -0.57
VAPB-204ENST00000475243 PRG3Q9Y2Y8 225 aaPredicted RBP11.46□□□□□ -0.57
VAPB-204ENST00000475243 GMPSP49915 693 aaPredicted RBP11.46□□□□□ -0.58
VAPB-204ENST00000475243 PAN2Q504Q3 1202 aaKnown RBP11.46□□□□□ -0.58
VAPB-204ENST00000475243 DEFB129Q9H1M3 183 aa11.46□□□□□ -0.58
VAPB-204ENST00000475243 TARSL2A2RTX5 802 aaKnown RBP11.46□□□□□ -0.58
VAPB-204ENST00000475243 ADSSL1Q8N142 457 aa11.46□□□□□ -0.58
VAPB-204ENST00000475243 ZKSCAN4Q969J2 545 aaPredicted RBP11.46□□□□□ -0.58
VAPB-204ENST00000475243 FAM136AQ96C01 138 aa11.46□□□□□ -0.58
VAPB-204ENST00000475243 TSPAN17Q96FV3 270 aa11.46□□□□□ -0.58
VAPB-204ENST00000475243 CATSPERBQ9H7T0 1116 aa11.46□□□□□ -0.58
VAPB-204ENST00000475243 RAD18Q9NS91 495 aa11.46□□□□□ -0.58
VAPB-204ENST00000475243 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.46□□□□□ -0.58
VAPB-204ENST00000475243 MAGEB2O15479 319 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 C2CD6Q53TS8 623 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 FAXCQ5TGI0 409 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 BTNL9Q6UXG8 535 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 TBC1D19Q8N5T2 526 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 CRAMP1Q96RY5 1269 aa11.45□□□□□ -0.58
VAPB-204ENST00000475243 WDR35Q9P2L0 1181 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms